Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCLP18206 AL138781.2-201ENST00000617896 1843 ntBASIC19.02■□□□□ 0.64
VCLP18206 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCLP18206 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
VCLP18206 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VCLP18206 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.02■□□□□ 0.64
VCLP18206 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCLP18206 AC004980.1-204ENST00000429707 299 ntBASIC19.02■□□□□ 0.64
VCLP18206 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
VCLP18206 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.02■□□□□ 0.64
VCLP18206 AL160286.2-201ENST00000567150 934 ntBASIC19.02■□□□□ 0.64
VCLP18206 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VCLP18206 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.02■□□□□ 0.64
VCLP18206 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
VCLP18206 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
VCLP18206 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VCLP18206 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.02■□□□□ 0.63
VCLP18206 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VCLP18206 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.02■□□□□ 0.63
VCLP18206 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VCLP18206 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
VCLP18206 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.01■□□□□ 0.63
VCLP18206 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.01■□□□□ 0.63
VCLP18206 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.01■□□□□ 0.63
VCLP18206 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.01■□□□□ 0.63
VCLP18206 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.01■□□□□ 0.63
VCLP18206 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.01■□□□□ 0.63
VCLP18206 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VCLP18206 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.01■□□□□ 0.63
VCLP18206 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.01■□□□□ 0.63
VCLP18206 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.01■□□□□ 0.63
VCLP18206 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.01■□□□□ 0.63
VCLP18206 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.01■□□□□ 0.63
VCLP18206 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.01■□□□□ 0.63
VCLP18206 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 AC120498.9-201ENST00000339021 3867 ntBASIC19.01■□□□□ 0.63
VCLP18206 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
VCLP18206 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.01■□□□□ 0.63
VCLP18206 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.01■□□□□ 0.63
VCLP18206 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.01■□□□□ 0.63
VCLP18206 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.01■□□□□ 0.63
VCLP18206 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VCLP18206 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 ZNF815P-204ENST00000434898 1737 ntBASIC19■□□□□ 0.63
VCLP18206 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
VCLP18206 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
VCLP18206 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19■□□□□ 0.63
VCLP18206 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
VCLP18206 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19■□□□□ 0.63
VCLP18206 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19■□□□□ 0.63
VCLP18206 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19■□□□□ 0.63
VCLP18206 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
VCLP18206 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19■□□□□ 0.63
VCLP18206 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19■□□□□ 0.63
VCLP18206 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19■□□□□ 0.63
VCLP18206 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VCLP18206 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19■□□□□ 0.63
VCLP18206 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19■□□□□ 0.63
VCLP18206 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
VCLP18206 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VCLP18206 UNC93B2-201ENST00000285383 730 ntBASIC18.99■□□□□ 0.63
VCLP18206 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.99■□□□□ 0.63
VCLP18206 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms