Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.53■■□□□ 1.04
COL11A1P12107 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A1P12107 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.53■■□□□ 1.04
COL11A1P12107 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.53■■□□□ 1.04
COL11A1P12107 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A1P12107 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.53■■□□□ 1.04
COL11A1P12107 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A1P12107 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A1P12107 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A1P12107 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A1P12107 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.53■■□□□ 1.04
COL11A1P12107 AC008556.1-201ENST00000610908 2040 ntBASIC21.53■■□□□ 1.04
COL11A1P12107 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.53■■□□□ 1.04
COL11A1P12107 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.53■■□□□ 1.04
COL11A1P12107 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.52■■□□□ 1.04
COL11A1P12107 KRT18P23-201ENST00000435622 1283 ntBASIC21.52■■□□□ 1.04
COL11A1P12107 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.52■■□□□ 1.04
COL11A1P12107 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
COL11A1P12107 AC104390.1-201ENST00000555663 520 ntBASIC21.52■■□□□ 1.04
COL11A1P12107 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.52■■□□□ 1.04
COL11A1P12107 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
COL11A1P12107 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
COL11A1P12107 MTMR9LP-203ENST00000426597 1545 ntBASIC21.52■■□□□ 1.04
COL11A1P12107 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.52■■□□□ 1.04
COL11A1P12107 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
COL11A1P12107 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
COL11A1P12107 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.52■■□□□ 1.04
COL11A1P12107 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.52■■□□□ 1.04
COL11A1P12107 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.52■■□□□ 1.04
COL11A1P12107 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.52■■□□□ 1.04
COL11A1P12107 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
COL11A1P12107 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL11A1P12107 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.52■■□□□ 1.04
COL11A1P12107 AC010240.3-201ENST00000607688 395 ntBASIC21.52■■□□□ 1.04
COL11A1P12107 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A1P12107 AL512353.2-201ENST00000448759 1962 ntBASIC21.51■■□□□ 1.03
COL11A1P12107 FP475955.4-201ENST00000623131 1990 ntBASIC21.51■■□□□ 1.03
COL11A1P12107 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A1P12107 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A1P12107 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A1P12107 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A1P12107 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A1P12107 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A1P12107 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.51■■□□□ 1.03
COL11A1P12107 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.51■■□□□ 1.03
COL11A1P12107 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.51■■□□□ 1.03
COL11A1P12107 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A1P12107 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.51■■□□□ 1.03
COL11A1P12107 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A1P12107 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL11A1P12107 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COL11A1P12107 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
COL11A1P12107 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A1P12107 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.5■■□□□ 1.03
COL11A1P12107 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A1P12107 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.5■■□□□ 1.03
COL11A1P12107 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.5■■□□□ 1.03
COL11A1P12107 AL732292.2-201ENST00000609649 430 ntBASIC21.5■■□□□ 1.03
COL11A1P12107 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.5■■□□□ 1.03
COL11A1P12107 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A1P12107 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.5■■□□□ 1.03
COL11A1P12107 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A1P12107 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.5■■□□□ 1.03
COL11A1P12107 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A1P12107 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A1P12107 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
COL11A1P12107 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A1P12107 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A1P12107 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.5■■□□□ 1.03
COL11A1P12107 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
COL11A1P12107 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.5■■□□□ 1.03
COL11A1P12107 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
COL11A1P12107 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.5■■□□□ 1.03
COL11A1P12107 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.5■■□□□ 1.03
COL11A1P12107 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
COL11A1P12107 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.5■■□□□ 1.03
COL11A1P12107 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A1P12107 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A1P12107 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL11A1P12107 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A1P12107 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A1P12107 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
COL11A1P12107 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
COL11A1P12107 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A1P12107 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A1P12107 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL11A1P12107 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms