Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.76■■□□□ 1.23
CHGBP05060 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.76■■□□□ 1.23
CHGBP05060 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CHGBP05060 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHGBP05060 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHGBP05060 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.75■■□□□ 1.23
CHGBP05060 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CHGBP05060 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CHGBP05060 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CHGBP05060 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.75■■□□□ 1.23
CHGBP05060 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CHGBP05060 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CHGBP05060 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.75■■□□□ 1.23
CHGBP05060 CCR12P-201ENST00000446203 998 ntBASIC22.75■■□□□ 1.23
CHGBP05060 TSPY17P-201ENST00000450329 467 ntBASIC22.75■■□□□ 1.23
CHGBP05060 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.75■■□□□ 1.23
CHGBP05060 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CHGBP05060 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CHGBP05060 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CHGBP05060 AL138966.2-201ENST00000621997 464 ntBASIC22.75■■□□□ 1.23
CHGBP05060 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
CHGBP05060 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CHGBP05060 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.75■■□□□ 1.23
CHGBP05060 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
CHGBP05060 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CHGBP05060 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHGBP05060 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHGBP05060 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CHGBP05060 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CHGBP05060 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
CHGBP05060 AC008556.1-201ENST00000610908 2040 ntBASIC22.74■■□□□ 1.23
CHGBP05060 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHGBP05060 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHGBP05060 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHGBP05060 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.74■■□□□ 1.23
CHGBP05060 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CHGBP05060 FAM210CP-201ENST00000445714 574 ntBASIC22.74■■□□□ 1.23
CHGBP05060 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.74■■□□□ 1.23
CHGBP05060 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.74■■□□□ 1.23
CHGBP05060 AC006011.2-201ENST00000621313 1158 ntBASIC22.74■■□□□ 1.23
CHGBP05060 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.74■■□□□ 1.23
CHGBP05060 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.74■■□□□ 1.23
CHGBP05060 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22.74■■□□□ 1.23
CHGBP05060 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CHGBP05060 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHGBP05060 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CHGBP05060 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CHGBP05060 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHGBP05060 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHGBP05060 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHGBP05060 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CHGBP05060 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHGBP05060 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC22.73■■□□□ 1.23
CHGBP05060 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
CHGBP05060 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHGBP05060 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHGBP05060 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.73■■□□□ 1.23
CHGBP05060 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHGBP05060 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHGBP05060 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHGBP05060 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.73■■□□□ 1.23
CHGBP05060 AC104076.2-201ENST00000448912 469 ntBASIC22.73■■□□□ 1.23
CHGBP05060 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.73■■□□□ 1.23
CHGBP05060 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.73■■□□□ 1.23
CHGBP05060 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.73■■□□□ 1.23
CHGBP05060 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
CHGBP05060 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.73■■□□□ 1.23
CHGBP05060 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
CHGBP05060 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHGBP05060 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.73■■□□□ 1.23
CHGBP05060 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22.73■■□□□ 1.23
CHGBP05060 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.73■■□□□ 1.23
CHGBP05060 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CHGBP05060 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.73■■□□□ 1.23
CHGBP05060 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHGBP05060 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CHGBP05060 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CHGBP05060 RCC2P3-201ENST00000418112 1537 ntBASIC22.72■■□□□ 1.23
CHGBP05060 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.72■■□□□ 1.23
CHGBP05060 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.72■■□□□ 1.23
CHGBP05060 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.72■■□□□ 1.23
CHGBP05060 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHGBP05060 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CHGBP05060 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHGBP05060 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHGBP05060 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHGBP05060 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHGBP05060 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.72■■□□□ 1.23
CHGBP05060 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.72■■□□□ 1.23
CHGBP05060 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHGBP05060 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
CHGBP05060 AC010653.2-201ENST00000623505 997 ntBASIC22.72■■□□□ 1.23
CHGBP05060 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHGBP05060 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHGBP05060 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CHGBP05060 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHGBP05060 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHGBP05060 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHGBP05060 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.71■■□□□ 1.23
CHGBP05060 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms