Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.61■■□□□ 1.05
MYCNP04198 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MYCNP04198 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MYCNP04198 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
MYCNP04198 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.61■■□□□ 1.05
MYCNP04198 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MYCNP04198 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.61■■□□□ 1.05
MYCNP04198 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.61■■□□□ 1.05
MYCNP04198 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MYCNP04198 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.61■■□□□ 1.05
MYCNP04198 ZNF444P1-201ENST00000559497 298 ntBASIC21.61■■□□□ 1.05
MYCNP04198 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC21.61■■□□□ 1.05
MYCNP04198 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.61■■□□□ 1.05
MYCNP04198 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.61■■□□□ 1.05
MYCNP04198 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.61■■□□□ 1.05
MYCNP04198 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MYCNP04198 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
MYCNP04198 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MYCNP04198 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
MYCNP04198 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MYCNP04198 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MYCNP04198 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MYCNP04198 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MYCNP04198 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
MYCNP04198 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MYCNP04198 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.6■■□□□ 1.05
MYCNP04198 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MYCNP04198 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.6■■□□□ 1.05
MYCNP04198 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.6■■□□□ 1.05
MYCNP04198 CLIC4P2-201ENST00000601934 717 ntBASIC21.6■■□□□ 1.05
MYCNP04198 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MYCNP04198 LINC01311-201ENST00000565162 1445 ntBASIC21.6■■□□□ 1.05
MYCNP04198 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MYCNP04198 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MYCNP04198 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MYCNP04198 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MYCNP04198 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
MYCNP04198 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
MYCNP04198 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 BTG3P1-201ENST00000435859 716 ntBASIC21.59■■□□□ 1.05
MYCNP04198 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC21.59■■□□□ 1.05
MYCNP04198 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC21.59■■□□□ 1.05
MYCNP04198 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.59■■□□□ 1.05
MYCNP04198 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 GCSHP2-201ENST00000560971 527 ntBASIC21.59■■□□□ 1.05
MYCNP04198 AL136038.3-201ENST00000561909 1096 ntBASIC21.59■■□□□ 1.05
MYCNP04198 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.59■■□□□ 1.05
MYCNP04198 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.59■■□□□ 1.05
MYCNP04198 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC21.59■■□□□ 1.05
MYCNP04198 RPAP2P1-201ENST00000603626 1168 ntBASIC21.59■■□□□ 1.05
MYCNP04198 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.59■■□□□ 1.05
MYCNP04198 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MYCNP04198 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
MYCNP04198 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MYCNP04198 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MYCNP04198 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MYCNP04198 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.58■■□□□ 1.05
MYCNP04198 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.58■■□□□ 1.05
MYCNP04198 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
MYCNP04198 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.58■■□□□ 1.05
MYCNP04198 AP000523.1-201ENST00000398242 1049 ntBASIC21.58■■□□□ 1.05
MYCNP04198 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
MYCNP04198 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.58■■□□□ 1.05
MYCNP04198 CT45A11P-201ENST00000448043 1134 ntBASIC21.58■■□□□ 1.05
MYCNP04198 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.58■■□□□ 1.05
MYCNP04198 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.58■■□□□ 1.05
MYCNP04198 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.58■■□□□ 1.05
MYCNP04198 AC083849.1-201ENST00000615227 514 ntBASIC21.58■■□□□ 1.05
MYCNP04198 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.58■■□□□ 1.05
MYCNP04198 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
MYCNP04198 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MYCNP04198 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
MYCNP04198 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.58■■□□□ 1.04
MYCNP04198 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
MYCNP04198 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
MYCNP04198 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.57■■□□□ 1.04
MYCNP04198 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MYCNP04198 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.57■■□□□ 1.04
MYCNP04198 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MYCNP04198 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.57■■□□□ 1.04
MYCNP04198 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.57■■□□□ 1.04
MYCNP04198 AC026310.3-201ENST00000625186 2373 ntBASIC21.57■■□□□ 1.04
MYCNP04198 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MYCNP04198 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MYCNP04198 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MYCNP04198 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MYCNP04198 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms