Protein–RNA interactions for Protein: P02730

SLC4A1, Band 3 anion transport protein, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A1P02730 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC4A1P02730 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC4A1P02730 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC4A1P02730 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC4A1P02730 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC4A1P02730 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC4A1P02730 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SLC4A1P02730 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SLC4A1P02730 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC4A1P02730 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC4A1P02730 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC4A1P02730 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC4A1P02730 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC4A1P02730 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC4A1P02730 B3GAT3P1-201ENST00000471720 806 ntBASIC19.2■□□□□ 0.66
SLC4A1P02730 AC011506.1-201ENST00000474329 610 ntBASIC19.2■□□□□ 0.66
SLC4A1P02730 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.2■□□□□ 0.66
SLC4A1P02730 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC4A1P02730 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC4A1P02730 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC4A1P02730 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC4A1P02730 MIR4785-201ENST00000585005 73 ntBASIC19.2■□□□□ 0.66
SLC4A1P02730 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC4A1P02730 AC141586.3-201ENST00000562166 1838 ntBASIC19.2■□□□□ 0.66
SLC4A1P02730 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC4A1P02730 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC4A1P02730 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC4A1P02730 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
SLC4A1P02730 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC4A1P02730 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC4A1P02730 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC4A1P02730 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SLC4A1P02730 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SLC4A1P02730 AL596275.1-201ENST00000423464 877 ntBASIC19.19■□□□□ 0.66
SLC4A1P02730 AC091390.4-202ENST00000476426 537 ntBASIC19.19■□□□□ 0.66
SLC4A1P02730 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.19■□□□□ 0.66
SLC4A1P02730 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.19■□□□□ 0.66
SLC4A1P02730 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC4A1P02730 REXO1L10P-201ENST00000615707 1290 ntBASIC19.19■□□□□ 0.66
SLC4A1P02730 REXO1L12P-201ENST00000622156 912 ntBASIC19.19■□□□□ 0.66
SLC4A1P02730 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SLC4A1P02730 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC4A1P02730 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC4A1P02730 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC4A1P02730 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC4A1P02730 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC4A1P02730 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC4A1P02730 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC4A1P02730 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC4A1P02730 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC4A1P02730 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC4A1P02730 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
SLC4A1P02730 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC4A1P02730 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
SLC4A1P02730 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC4A1P02730 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC4A1P02730 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC4A1P02730 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC4A1P02730 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC4A1P02730 TSPY23P-201ENST00000440136 739 ntBASIC19.18■□□□□ 0.66
SLC4A1P02730 AC008040.2-201ENST00000461049 708 ntBASIC19.18■□□□□ 0.66
SLC4A1P02730 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC4A1P02730 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC4A1P02730 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC4A1P02730 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC4A1P02730 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC4A1P02730 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SLC4A1P02730 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
SLC4A1P02730 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SLC4A1P02730 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
SLC4A1P02730 AL161938.1-201ENST00000569833 2180 ntBASIC19.17■□□□□ 0.66
SLC4A1P02730 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC4A1P02730 AC004408.2-201ENST00000623613 2777 ntBASIC19.17■□□□□ 0.66
SLC4A1P02730 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC4A1P02730 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC4A1P02730 TNXA-203ENST00000507684 2038 ntBASIC19.17■□□□□ 0.66
SLC4A1P02730 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.17■□□□□ 0.66
SLC4A1P02730 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC4A1P02730 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SLC4A1P02730 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC4A1P02730 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.17■□□□□ 0.66
SLC4A1P02730 FAM207BP-201ENST00000447172 505 ntBASIC19.17■□□□□ 0.66
SLC4A1P02730 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC4A1P02730 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC4A1P02730 MIR4497-201ENST00000583208 89 ntBASIC19.17■□□□□ 0.66
SLC4A1P02730 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC4A1P02730 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms