Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC020907.5-201ENST00000624372 1936 ntBASIC16.89■□□□□ 0.29
CLDN1O95832 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN1O95832 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN1O95832 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN1O95832 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN1O95832 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLDN1O95832 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLDN1O95832 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN1O95832 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN1O95832 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLDN1O95832 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLDN1O95832 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN1O95832 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN1O95832 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN1O95832 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN1O95832 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN1O95832 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN1O95832 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN1O95832 AC011498.5-201ENST00000592027 486 ntBASIC16.88■□□□□ 0.29
CLDN1O95832 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 AL121672.3-201ENST00000608644 468 ntBASIC16.88■□□□□ 0.29
CLDN1O95832 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CLDN1O95832 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN1O95832 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN1O95832 BX119927.1-201ENST00000636596 1552 ntBASIC16.88■□□□□ 0.29
CLDN1O95832 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN1O95832 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLDN1O95832 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN1O95832 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN1O95832 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN1O95832 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 KRT16P6-202ENST00000425692 1426 ntBASIC16.87■□□□□ 0.29
CLDN1O95832 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN1O95832 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLDN1O95832 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLDN1O95832 PCDHAC2-203ENST00000615316 3011 ntBASIC16.87■□□□□ 0.29
CLDN1O95832 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
CLDN1O95832 AC092597.1-201ENST00000487352 616 ntBASIC16.87■□□□□ 0.29
CLDN1O95832 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 AP002414.4-201ENST00000589764 1148 ntBASIC16.87■□□□□ 0.29
CLDN1O95832 AL671883.3-201ENST00000603274 991 ntBASIC16.87■□□□□ 0.29
CLDN1O95832 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN1O95832 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLDN1O95832 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
CLDN1O95832 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CLDN1O95832 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CLDN1O95832 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
CLDN1O95832 AL391422.3-201ENST00000603791 2761 ntBASIC16.87■□□□□ 0.29
CLDN1O95832 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN1O95832 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLDN1O95832 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN1O95832 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLDN1O95832 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN1O95832 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN1O95832 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN1O95832 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CLDN1O95832 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN1O95832 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLDN1O95832 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN1O95832 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN1O95832 TSPY19P-201ENST00000418461 509 ntBASIC16.86■□□□□ 0.29
CLDN1O95832 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLDN1O95832 TSPY18P-201ENST00000441642 509 ntBASIC16.86■□□□□ 0.29
CLDN1O95832 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLDN1O95832 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN1O95832 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.86■□□□□ 0.29
CLDN1O95832 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN1O95832 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN1O95832 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.86■□□□□ 0.29
CLDN1O95832 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN1O95832 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms