Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.5■□□□□ 0.71
TSPAN3O60637 IRX1P1-201ENST00000438849 1838 ntBASIC19.5■□□□□ 0.71
TSPAN3O60637 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN3O60637 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN3O60637 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TSPAN3O60637 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
TSPAN3O60637 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN3O60637 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN3O60637 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TSPAN3O60637 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.49■□□□□ 0.71
TSPAN3O60637 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN3O60637 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.49■□□□□ 0.71
TSPAN3O60637 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN3O60637 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN3O60637 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TSPAN3O60637 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TSPAN3O60637 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.49■□□□□ 0.71
TSPAN3O60637 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN3O60637 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN3O60637 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.49■□□□□ 0.71
TSPAN3O60637 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TSPAN3O60637 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TSPAN3O60637 COX11P1-201ENST00000489116 835 ntBASIC19.49■□□□□ 0.71
TSPAN3O60637 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.49■□□□□ 0.71
TSPAN3O60637 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.49■□□□□ 0.71
TSPAN3O60637 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TSPAN3O60637 NTF6B-201ENST00000591913 560 ntBASIC19.49■□□□□ 0.71
TSPAN3O60637 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN3O60637 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN3O60637 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.49■□□□□ 0.71
TSPAN3O60637 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN3O60637 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
TSPAN3O60637 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TSPAN3O60637 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.49■□□□□ 0.71
TSPAN3O60637 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN3O60637 GPAT2P1-201ENST00000444924 1672 ntBASIC19.49■□□□□ 0.71
TSPAN3O60637 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN3O60637 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TSPAN3O60637 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.49■□□□□ 0.71
TSPAN3O60637 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TSPAN3O60637 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
TSPAN3O60637 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TSPAN3O60637 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.48■□□□□ 0.71
TSPAN3O60637 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.48■□□□□ 0.71
TSPAN3O60637 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.48■□□□□ 0.71
TSPAN3O60637 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.48■□□□□ 0.71
TSPAN3O60637 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.48■□□□□ 0.71
TSPAN3O60637 YBX1P2-201ENST00000489612 999 ntBASIC19.48■□□□□ 0.71
TSPAN3O60637 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.48■□□□□ 0.71
TSPAN3O60637 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.48■□□□□ 0.71
TSPAN3O60637 AL512604.3-201ENST00000569583 964 ntBASIC19.48■□□□□ 0.71
TSPAN3O60637 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.48■□□□□ 0.71
TSPAN3O60637 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.48■□□□□ 0.71
TSPAN3O60637 AL023973.1-201ENST00000624619 620 ntBASIC19.48■□□□□ 0.71
TSPAN3O60637 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.48■□□□□ 0.71
TSPAN3O60637 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.48■□□□□ 0.71
TSPAN3O60637 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.48■□□□□ 0.71
TSPAN3O60637 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 AC141586.3-201ENST00000562166 1838 ntBASIC19.48■□□□□ 0.71
TSPAN3O60637 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.48■□□□□ 0.71
TSPAN3O60637 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TSPAN3O60637 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.48■□□□□ 0.71
TSPAN3O60637 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TSPAN3O60637 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TSPAN3O60637 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN3O60637 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TSPAN3O60637 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.47■□□□□ 0.71
TSPAN3O60637 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN3O60637 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
TSPAN3O60637 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN3O60637 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TSPAN3O60637 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TSPAN3O60637 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.47■□□□□ 0.71
TSPAN3O60637 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.47■□□□□ 0.71
TSPAN3O60637 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.47■□□□□ 0.71
TSPAN3O60637 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.47■□□□□ 0.71
TSPAN3O60637 AC009947.2-201ENST00000444014 672 ntBASIC19.47■□□□□ 0.71
TSPAN3O60637 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.47■□□□□ 0.71
TSPAN3O60637 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.47■□□□□ 0.71
TSPAN3O60637 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.47■□□□□ 0.71
TSPAN3O60637 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.47■□□□□ 0.71
TSPAN3O60637 AC011558.1-201ENST00000623459 338 ntBASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms