Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.23■□□□□ 0.51
SLC28A2O43868 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC28A2O43868 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC28A2O43868 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC28A2O43868 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.23■□□□□ 0.51
SLC28A2O43868 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC28A2O43868 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC28A2O43868 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC28A2O43868 MYC-208ENST00000641036 567 ntBASIC18.23■□□□□ 0.51
SLC28A2O43868 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC28A2O43868 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SLC28A2O43868 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SLC28A2O43868 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC28A2O43868 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC28A2O43868 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.22■□□□□ 0.51
SLC28A2O43868 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.22■□□□□ 0.51
SLC28A2O43868 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SLC28A2O43868 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC28A2O43868 HCG4P8-203ENST00000443049 980 ntBASIC18.22■□□□□ 0.51
SLC28A2O43868 KSR1P1-201ENST00000446298 240 ntBASIC18.22■□□□□ 0.51
SLC28A2O43868 AC092647.4-201ENST00000457211 535 ntBASIC18.22■□□□□ 0.51
SLC28A2O43868 AC128688.1-201ENST00000487626 519 ntBASIC18.22■□□□□ 0.51
SLC28A2O43868 EGLN1P1-201ENST00000531623 762 ntBASIC18.22■□□□□ 0.51
SLC28A2O43868 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.22■□□□□ 0.51
SLC28A2O43868 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SLC28A2O43868 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 KRT16P1-201ENST00000399124 1418 ntBASIC18.22■□□□□ 0.51
SLC28A2O43868 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SLC28A2O43868 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SLC28A2O43868 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC28A2O43868 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC28A2O43868 TFP1-202ENST00000475455 1573 ntBASIC18.21■□□□□ 0.51
SLC28A2O43868 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SLC28A2O43868 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SLC28A2O43868 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC28A2O43868 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC28A2O43868 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SLC28A2O43868 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SLC28A2O43868 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC28A2O43868 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC28A2O43868 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC28A2O43868 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC28A2O43868 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC28A2O43868 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC28A2O43868 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC28A2O43868 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC28A2O43868 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC28A2O43868 FAM8A6P-201ENST00000407496 1135 ntBASIC18.21■□□□□ 0.51
SLC28A2O43868 AC117947.1-201ENST00000427448 529 ntBASIC18.21■□□□□ 0.51
SLC28A2O43868 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC28A2O43868 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC28A2O43868 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC28A2O43868 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC28A2O43868 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SLC28A2O43868 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC28A2O43868 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC28A2O43868 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC28A2O43868 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC28A2O43868 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SLC28A2O43868 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC28A2O43868 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC28A2O43868 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SLC28A2O43868 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC28A2O43868 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC28A2O43868 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 PCED1CP-201ENST00000419887 785 ntBASIC18.2■□□□□ 0.5
SLC28A2O43868 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC28A2O43868 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.2■□□□□ 0.5
SLC28A2O43868 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC28A2O43868 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC28A2O43868 CLEC4GP1-201ENST00000596555 870 ntBASIC18.2■□□□□ 0.5
SLC28A2O43868 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC28A2O43868 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SLC28A2O43868 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms