Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 AC007318.2-201ENST00000620999 243 ntBASIC3.8□□□□□ -1.8
TNFRSF11AQ9Y6Q6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFRSF11AQ9Y6Q6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFRSF11AQ9Y6Q6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFRSF11AQ9Y6Q6 MAPK10-373ENST00000641983 6772 ntBASIC3.8□□□□□ -1.8
TNFRSF11AQ9Y6Q6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 snoU2_19.4-201ENST00000364329 80 ntBASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 SNORA44-201ENST00000384584 132 ntBASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 AL133475.1-201ENST00000404414 305 ntBASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 RN7SKP220-201ENST00000410611 288 ntBASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 RPL36AP48-201ENST00000485521 314 ntBASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 RN7SL20P-201ENST00000488827 297 ntBASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 MIR4724-201ENST00000579485 89 ntBASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 AC025754.2-201ENST00000606491 432 ntBASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 AC073476.4-201ENST00000628409 72 ntBASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TNFRSF11AQ9Y6Q6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 RNU6-834P-201ENST00000362367 110 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 RNU6-199P-201ENST00000362954 107 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 SNORD56.3-201ENST00000363507 71 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 RNU6-271P-201ENST00000363858 105 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 MIR1185-2-201ENST00000408687 86 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 AL159169.1-201ENST00000421119 127 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 HMGN2P20-201ENST00000437531 273 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 AL137159.1-201ENST00000452808 512 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 RPL23AP62-201ENST00000463396 453 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 RPL23AP94-201ENST00000512518 302 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 AC090616.3-201ENST00000582184 217 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 AL137843.1-201ENST00000605078 385 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 AL365222.1-201ENST00000614661 98 ntBASIC3.78□□□□□ -1.8
TNFRSF11AQ9Y6Q6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 MIR422A-201ENST00000362286 90 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 Y_RNA.24-201ENST00000362508 103 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 Y_RNA.127-201ENST00000363386 109 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNU1-105P-201ENST00000363470 161 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNA5SP38-201ENST00000410750 119 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 AC010154.1-201ENST00000425857 269 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNU7-170P-201ENST00000459303 61 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 AC114982.1-201ENST00000469402 321 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 AL049873.1-201ENST00000480540 376 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNA5SP309-201ENST00000516670 106 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 HSPE1P18-201ENST00000517602 280 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 AC000403.1-201ENST00000613696 3585 ntBASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.77□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 SNORD32B-201ENST00000364460 84 ntBASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNU4-11P-201ENST00000365287 132 ntBASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNU6-728P-201ENST00000365375 104 ntBASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 MIR548B-201ENST00000385247 97 ntBASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNU4-43P-201ENST00000410628 137 ntBASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 AC097463.2-201ENST00000421074 142 ntBASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNU7-141P-201ENST00000459304 62 ntBASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 SNORA31.1-201ENST00000515993 133 ntBASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 SNORA31.5-201ENST00000516190 133 ntBASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 AC008739.2-201ENST00000597006 317 ntBASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 AL670379.2-201ENST00000604983 252 ntBASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
TNFRSF11AQ9Y6Q6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 AF127577.6-201ENST00000623352 2191 ntBASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 MIR367-201ENST00000362299 68 ntBASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNA5SP295-201ENST00000362655 121 ntBASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 Y_RNA.172-201ENST00000363765 102 ntBASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNU6-969P-201ENST00000383900 105 ntBASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNU6-643P-201ENST00000384018 107 ntBASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 MIR873-201ENST00000401120 77 ntBASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 MTND4LP9-201ENST00000427694 174 ntBASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNU7-116P-201ENST00000516940 62 ntBASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 MIR622-201ENST00000638396 96 ntBASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
TNFRSF11AQ9Y6Q6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms