Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 AC026407.1-201ENST00000518369 204 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.92□□□□□ -2.26
LRRC42Q9Y546 AC026371.1-201ENST00000551867 419 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 TPRKBP2-201ENST00000565969 475 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 AC097065.2-201ENST00000608159 533 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 AC040896.1-201ENST00000613819 479 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 AL157834.3-201ENST00000615543 103 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 AC137590.2-201ENST00000619709 240 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 AC022079.1-201ENST00000621546 602 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 AC068137.3-201ENST00000639191 341 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 OR4G1P-203ENST00000641984 1631 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 RNA5SP327-201ENST00000362494 101 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 RNU6-254P-201ENST00000363377 107 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 RNU1-124P-201ENST00000363861 145 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 Y_RNA.372-201ENST00000365599 102 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 RNU6-259P-201ENST00000383999 107 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 SNORD116-9-201ENST00000384000 95 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 SNORD116-3-201ENST00000384287 95 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 SNORD116-7-201ENST00000384404 95 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 SNORD116-5-201ENST00000384462 95 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 MIR1253-201ENST00000408273 105 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 MIR320B2-201ENST00000408479 138 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.91□□□□□ -2.26
LRRC42Q9Y546 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC42Q9Y546 SNX2P2-201ENST00000424553 323 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC42Q9Y546 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.91□□□□□ -2.26
LRRC42Q9Y546 RNU6-221P-201ENST00000459541 99 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 RPS26P45-201ENST00000471748 340 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 AL163195.1-201ENST00000496941 348 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 AL133373.1-201ENST00000497098 94 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 AC093852.1-201ENST00000503587 266 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.91□□□□□ -2.26
LRRC42Q9Y546 AC103851.1-201ENST00000506833 274 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 Y_RNA.665-201ENST00000516177 98 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 AL929325.1-201ENST00000603096 117 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 MIR6078-201ENST00000611069 100 ntBASIC0.91□□□□□ -2.26
LRRC42Q9Y546 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
LRRC42Q9Y546 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
LRRC42Q9Y546 RNU6-1123P-201ENST00000362347 106 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 SNORD115-8-201ENST00000363856 82 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 SNORD115-38-201ENST00000365037 82 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 RNU6-128P-201ENST00000383976 107 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 RNU6-1042P-201ENST00000384204 107 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
LRRC42Q9Y546 RNU6-780P-201ENST00000391030 104 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 RNA5SP323-201ENST00000391094 133 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 AL356776.1-201ENST00000406574 447 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.9□□□□□ -2.27
LRRC42Q9Y546 POLR2J4-204ENST00000418424 324 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.9□□□□□ -2.27
LRRC42Q9Y546 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.9□□□□□ -2.27
LRRC42Q9Y546 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.9□□□□□ -2.27
LRRC42Q9Y546 Z82188.1-201ENST00000436709 154 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.9□□□□□ -2.27
LRRC42Q9Y546 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.9□□□□□ -2.27
LRRC42Q9Y546 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.9□□□□□ -2.27
LRRC42Q9Y546 SNORD116-28-201ENST00000516123 91 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 SNORA31.10-201ENST00000516482 106 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 AC010620.1-201ENST00000601088 1102 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 MZT1P2-201ENST00000604387 248 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 SNORD11B-201ENST00000607707 90 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 AC245008.1-201ENST00000608123 476 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 AC021506.2-201ENST00000612354 169 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 Z99129.1-201ENST00000612510 255 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.9□□□□□ -2.27
LRRC42Q9Y546 AC124864.2-201ENST00000624736 186 ntBASIC0.9□□□□□ -2.27
LRRC42Q9Y546 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
LRRC42Q9Y546 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
LRRC42Q9Y546 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.89□□□□□ -2.27
LRRC42Q9Y546 RNU4-38P-201ENST00000364472 129 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 RNA5SP259-201ENST00000365541 109 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 RNU6-245P-201ENST00000384020 107 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 SNORA17.3-201ENST00000391159 129 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.89□□□□□ -2.27
LRRC42Q9Y546 AP1B1P2-201ENST00000416196 106 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 AC008134.1-201ENST00000420943 193 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 AC010154.1-201ENST00000425857 269 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 AC087343.1-201ENST00000477341 475 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.89□□□□□ -2.27
LRRC42Q9Y546 AC019235.1-201ENST00000503847 207 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 RNA5SP454-201ENST00000517231 127 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 RNU7-128P-201ENST00000517247 62 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.89□□□□□ -2.27
LRRC42Q9Y546 AL512360.1-201ENST00000555346 234 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.89□□□□□ -2.27
LRRC42Q9Y546 AC010525.2-201ENST00000590920 195 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 AC022217.4-201ENST00000604389 163 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.89□□□□□ -2.27
LRRC42Q9Y546 MIR378A-201ENST00000362177 66 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 Y_RNA.151-201ENST00000363566 112 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 SNORD115-32-201ENST00000364079 82 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 RNU6-1240P-201ENST00000365155 104 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 RNU6-95P-201ENST00000384697 107 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms