Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.09□□□□□ -1.92
SF3B6Q9Y3B4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 Z82209.1-201ENST00000422141 2135 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 MFSD8-233ENST00000641482 4860 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 RNU1-23P-201ENST00000363361 144 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 RNU6-271P-201ENST00000363858 105 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 SNORD50.2-201ENST00000365465 70 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 SNORD21-201ENST00000383953 95 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 MT-TT-201ENST00000387460 66 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 MIR526A2-201ENST00000390198 65 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 PTMAP2-201ENST00000397627 327 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 EBAG9P1-201ENST00000418955 543 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 CR769767.1-201ENST00000436337 346 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 HSPE1P13-201ENST00000451143 297 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 AL133162.1-201ENST00000463228 453 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 CKS1BP2-201ENST00000497342 240 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 AC005840.1-201ENST00000498412 377 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 RNA5SP20-201ENST00000515976 84 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 RNU7-115P-201ENST00000516433 55 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 RNA5SP490-201ENST00000517141 136 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 AC025647.1-201ENST00000517879 253 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 AC022616.8-201ENST00000533569 253 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 AP001485.1-201ENST00000604799 199 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 AC073476.4-201ENST00000628409 72 ntBASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SF3B6Q9Y3B4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 RN7SKP27-201ENST00000410684 333 ntBASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 BMS1P22-201ENST00000414726 313 ntBASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 AC016909.1-201ENST00000415916 166 ntBASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 AL161788.1-201ENST00000441805 169 ntBASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 AC107934.2-201ENST00000518653 310 ntBASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 AC087499.8-201ENST00000578406 226 ntBASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 MIR4724-201ENST00000579485 89 ntBASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.07□□□□□ -1.92
SF3B6Q9Y3B4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 MIR367-201ENST00000362299 68 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 RNU6-151P-201ENST00000364158 107 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 Y_RNA.229-201ENST00000364347 113 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 Y_RNA.400-201ENST00000383963 111 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 RNU6-1235P-201ENST00000384559 107 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 MIR616-201ENST00000385293 97 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 MIR548I2-201ENST00000408348 149 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 SNORA36B-201ENST00000410438 131 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 AC009969.1-201ENST00000438726 172 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 AL137159.1-201ENST00000452808 512 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 RNU6-498P-201ENST00000459468 107 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 RN7SL542P-201ENST00000467147 294 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 RNU1-143P-201ENST00000516296 146 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 SNORD116-25-201ENST00000516517 92 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 AC109810.1-201ENST00000534066 224 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 MIR4431-201ENST00000579990 94 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 U1.23-201ENST00000610293 146 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 RNU1-68P-201ENST00000615382 146 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 U1.39-201ENST00000621562 146 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 AP003355.3-201ENST00000623465 114 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 AL159152.1-201ENST00000635019 2587 ntBASIC3.06□□□□□ -1.92
SF3B6Q9Y3B4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 SNORD113-1-201ENST00000365321 69 ntBASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 AL359837.1-201ENST00000381357 287 ntBASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 RNU6-144P-201ENST00000383951 107 ntBASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 RNU6-239P-201ENST00000390990 99 ntBASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 AL133547.1-201ENST00000448546 220 ntBASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 AC080013.2-201ENST00000460866 323 ntBASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 AC010531.2-201ENST00000465012 153 ntBASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 RN7SL330P-201ENST00000469709 307 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms