Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 MIR34B-201ENST00000385076 84 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 SNORA40.5-201ENST00000391061 128 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 SNORA11.1-201ENST00000408133 129 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 RNU6-855P-201ENST00000410395 104 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 Y_RNA.630-201ENST00000411370 108 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 AC012306.1-201ENST00000423267 114 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 AL353705.1-201ENST00000433468 480 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 CST9LP2-201ENST00000437612 320 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 MTCO1P44-201ENST00000441935 243 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 AC009237.8-201ENST00000445492 379 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 AC115115.1-201ENST00000449927 248 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 RNA5SP54-201ENST00000516951 92 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 RNU1-117P-201ENST00000517041 158 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 Z82209.1-201ENST00000422141 2135 ntBASIC3.14□□□□□ -1.91
CNOT11Q9UKZ1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 SNORD46.1-201ENST00000364139 104 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 RNA5SP139-201ENST00000364340 117 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 RNU6-755P-201ENST00000364400 103 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 RNU6-1082P-201ENST00000364574 107 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 U8.7-201ENST00000364940 136 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 RNVU1-14-201ENST00000384770 164 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 MIR208B-201ENST00000401172 77 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 AL031003.1-201ENST00000404229 172 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 RNA5SP344-201ENST00000411081 104 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 Y_RNA.622-201ENST00000411091 108 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 RPL39P29-201ENST00000447779 157 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 RPL21P10-201ENST00000463521 490 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 RPL31P41-201ENST00000477967 372 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 AC103975.1-201ENST00000482506 483 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 RPL32P34-201ENST00000486380 400 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 RNU2-12P-201ENST00000517216 168 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 AC136628.3-201ENST00000521868 290 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 MIR3921-201ENST00000577308 85 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 AL162713.1-201ENST00000604480 262 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 MIR3529-201ENST00000637713 78 ntBASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.13□□□□□ -1.91
CNOT11Q9UKZ1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 Y_RNA.229-201ENST00000364347 113 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 RNU6-1141P-201ENST00000364520 107 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 SNORA72.4-201ENST00000384174 132 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 MIR616-201ENST00000385293 97 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 RNA5SP38-201ENST00000410750 119 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 AC012308.1-201ENST00000451232 178 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 AC090525.1-201ENST00000479116 478 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 RN7SKP43-201ENST00000516173 320 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 SNORA31.23-201ENST00000517219 133 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 AC021231.3-201ENST00000558497 370 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 AL138880.2-201ENST00000616214 239 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 AL359693.1-201ENST00000614959 2407 ntBASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CNOT11Q9UKZ1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 Y_RNA.35-201ENST00000362601 101 ntBASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 RNU6-1205P-201ENST00000363625 106 ntBASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 RNU7-141P-201ENST00000459304 62 ntBASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 RPS29P20-201ENST00000489592 171 ntBASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 Y_RNA.712-201ENST00000517011 92 ntBASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 RNU6-537P-201ENST00000517277 103 ntBASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 AC133485.4-201ENST00000561835 220 ntBASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 AC138907.4-201ENST00000570107 226 ntBASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 AC011471.1-201ENST00000585766 187 ntBASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 AC012468.1-201ENST00000604888 430 ntBASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 AC007179.3-201ENST00000604976 235 ntBASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 AP001340.1-201ENST00000624405 217 ntBASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CNOT11Q9UKZ1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.1□□□□□ -1.91
CNOT11Q9UKZ1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNOT11Q9UKZ1 RNU6-884P-201ENST00000363889 107 ntBASIC3.1□□□□□ -1.91
CNOT11Q9UKZ1 Y_RNA.309-201ENST00000365046 111 ntBASIC3.1□□□□□ -1.91
CNOT11Q9UKZ1 RNU6-1280P-201ENST00000365211 107 ntBASIC3.1□□□□□ -1.91
CNOT11Q9UKZ1 Y_RNA.341-201ENST00000365341 102 ntBASIC3.1□□□□□ -1.91
CNOT11Q9UKZ1 CD24P4-201ENST00000382840 243 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms