Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.86□□□□□ -2.27
CLN6Q9NWW5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.86□□□□□ -2.27
CLN6Q9NWW5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.86□□□□□ -2.27
CLN6Q9NWW5 AC091133.4-201ENST00000511142 308 ntBASIC0.86□□□□□ -2.27
CLN6Q9NWW5 AP000889.1-201ENST00000530968 660 ntBASIC0.86□□□□□ -2.27
CLN6Q9NWW5 AC026371.1-201ENST00000551867 419 ntBASIC0.86□□□□□ -2.27
CLN6Q9NWW5 AL137100.2-201ENST00000555786 315 ntBASIC0.86□□□□□ -2.27
CLN6Q9NWW5 AL390123.1-201ENST00000603216 237 ntBASIC0.86□□□□□ -2.27
CLN6Q9NWW5 AL021879.1-201ENST00000611756 288 ntBASIC0.86□□□□□ -2.27
CLN6Q9NWW5 SNORD3E-202ENST00000627253 216 ntBASIC0.86□□□□□ -2.27
CLN6Q9NWW5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CLN6Q9NWW5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CLN6Q9NWW5 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.85□□□□□ -2.27
CLN6Q9NWW5 RNU6-790P-201ENST00000384479 105 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 RNU6-440P-201ENST00000390882 105 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AL590002.1-201ENST00000406554 418 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AP1B1P2-201ENST00000416196 106 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AL353572.1-201ENST00000442490 417 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 MTND3P16-201ENST00000452205 344 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.85□□□□□ -2.27
CLN6Q9NWW5 RNU6-922P-201ENST00000516753 99 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 RNU6-1198P-201ENST00000516904 67 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AC022432.1-201ENST00000595739 310 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AC119751.7-201ENST00000600494 245 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AL133215.3-201ENST00000609801 448 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AC063944.3-201ENST00000609969 533 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 FAM157A-202ENST00000615155 405 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AL513423.1-201ENST00000621695 132 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AC106754.2-201ENST00000623006 233 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 AC097520.1-201ENST00000624435 385 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
CLN6Q9NWW5 OR4G1P-203ENST00000641984 1631 ntBASIC0.85□□□□□ -2.27
CLN6Q9NWW5 Y_RNA.409-201ENST00000383990 98 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 Y_RNA.481-201ENST00000384373 102 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 RNU6-505P-201ENST00000384427 107 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 Y_RNA.553-201ENST00000384670 102 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 MIR32-201ENST00000384965 70 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 RAB28P5-201ENST00000427490 651 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 AC108667.1-201ENST00000428618 249 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.84□□□□□ -2.27
CLN6Q9NWW5 snoU13.23-201ENST00000458863 104 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.84□□□□□ -2.27
CLN6Q9NWW5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.84□□□□□ -2.27
CLN6Q9NWW5 SNORA31.2-201ENST00000516019 134 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 SNORA31.4-201ENST00000516049 129 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 SNORA25.14-201ENST00000516481 132 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 AC004584.2-201ENST00000570407 410 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 AC136932.1-201ENST00000574771 208 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 MIR5695-201ENST00000579717 85 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.84□□□□□ -2.27
CLN6Q9NWW5 AL513534.2-201ENST00000603836 250 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.84□□□□□ -2.27
CLN6Q9NWW5 AC073349.3-201ENST00000617616 186 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.84□□□□□ -2.27
CLN6Q9NWW5 AC078883.4-201ENST00000623218 367 ntBASIC0.84□□□□□ -2.27
CLN6Q9NWW5 U3.8-201ENST00000363675 217 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 SNORD113-7-201ENST00000363762 77 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 SNORD115-8-201ENST00000363856 82 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 SNORD87-201ENST00000364849 89 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 RNU4-9P-201ENST00000364951 139 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 SNORD115-38-201ENST00000365037 82 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 Y_RNA.359-201ENST00000365498 102 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 MIR514A2-201ENST00000385131 88 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 MIR514A3-201ENST00000385132 88 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 MTCO1P19-201ENST00000443487 500 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 AC108210.2-201ENST00000503681 201 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.83□□□□□ -2.28
CLN6Q9NWW5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
CLN6Q9NWW5 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.83□□□□□ -2.28
CLN6Q9NWW5 AC007834.2-201ENST00000536310 343 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.83□□□□□ -2.28
CLN6Q9NWW5 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 AC006504.8-201ENST00000621046 635 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 AL133216.2-202ENST00000634512 349 ntBASIC0.83□□□□□ -2.28
CLN6Q9NWW5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CLN6Q9NWW5 AC121333.1-201ENST00000567488 2709 ntBASIC0.82□□□□□ -2.28
CLN6Q9NWW5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CLN6Q9NWW5 AC018630.2-201ENST00000534866 2403 ntBASIC0.82□□□□□ -2.28
CLN6Q9NWW5 SNORD50.1-201ENST00000362987 71 ntBASIC0.82□□□□□ -2.28
CLN6Q9NWW5 Y_RNA.167-201ENST00000363735 109 ntBASIC0.82□□□□□ -2.28
CLN6Q9NWW5 RNU4-76P-201ENST00000364509 141 ntBASIC0.82□□□□□ -2.28
CLN6Q9NWW5 Y_RNA.319-201ENST00000365138 92 ntBASIC0.82□□□□□ -2.28
CLN6Q9NWW5 RNU6-128P-201ENST00000383976 107 ntBASIC0.82□□□□□ -2.28
CLN6Q9NWW5 MIR19B1-201ENST00000384829 87 ntBASIC0.82□□□□□ -2.28
CLN6Q9NWW5 RNU6-910P-201ENST00000390844 107 ntBASIC0.82□□□□□ -2.28
CLN6Q9NWW5 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.82□□□□□ -2.28
CLN6Q9NWW5 MIR1185-2-201ENST00000408687 86 ntBASIC0.82□□□□□ -2.28
CLN6Q9NWW5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.82□□□□□ -2.28
CLN6Q9NWW5 BTF3P4-201ENST00000418852 495 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 305.6 ms