Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU6-82P-201ENST00000363970 107 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 RNU6-214P-201ENST00000384130 107 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 RNU6-950P-201ENST00000384651 107 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 RNU6-325P-201ENST00000411132 105 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 TIMM9P3-201ENST00000428659 274 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.89□□□□□ -2.27
TREX1Q9NSU2 AL359672.1-201ENST00000442302 409 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.89□□□□□ -2.27
TREX1Q9NSU2 AC007215.1-201ENST00000464893 276 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 AC092436.3-201ENST00000511788 257 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 RN7SKP298-201ENST00000515950 94 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 SNORA19.2-201ENST00000516013 114 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 Y_RNA.717-201ENST00000517106 92 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 AC024995.1-201ENST00000523014 93 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.89□□□□□ -2.27
TREX1Q9NSU2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.89□□□□□ -2.27
TREX1Q9NSU2 AL118558.2-201ENST00000556294 238 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.89□□□□□ -2.27
TREX1Q9NSU2 TPRKBP2-201ENST00000565969 475 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 MIR4661-201ENST00000582720 75 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 SNORA4-201ENST00000584302 138 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 BX284668.6-201ENST00000606899 438 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 AL158063.1-201ENST00000615349 536 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 AC137590.2-201ENST00000619709 240 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 snoZ196.1-201ENST00000625269 89 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 SCARNA4-201ENST00000629045 128 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 MIR6767-201ENST00000637302 66 ntBASIC0.89□□□□□ -2.27
TREX1Q9NSU2 RNU1-124P-201ENST00000363861 145 ntBASIC0.88□□□□□ -2.27
TREX1Q9NSU2 SNORA25-201ENST00000384384 134 ntBASIC0.88□□□□□ -2.27
TREX1Q9NSU2 MIR222-201ENST00000384992 110 ntBASIC0.88□□□□□ -2.27
TREX1Q9NSU2 MIR487A-201ENST00000385009 80 ntBASIC0.88□□□□□ -2.27
TREX1Q9NSU2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.88□□□□□ -2.27
TREX1Q9NSU2 RPS23P4-201ENST00000487908 423 ntBASIC0.88□□□□□ -2.27
TREX1Q9NSU2 RNU6-1332P-201ENST00000516666 104 ntBASIC0.88□□□□□ -2.27
TREX1Q9NSU2 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.88□□□□□ -2.27
TREX1Q9NSU2 AL078603.1-201ENST00000603824 313 ntBASIC0.88□□□□□ -2.27
TREX1Q9NSU2 AC121247.2-201ENST00000604776 136 ntBASIC0.88□□□□□ -2.27
TREX1Q9NSU2 AC021506.2-201ENST00000612354 169 ntBASIC0.88□□□□□ -2.27
TREX1Q9NSU2 AC139792.3-201ENST00000623525 224 ntBASIC0.88□□□□□ -2.27
TREX1Q9NSU2 RNU6-1240P-201ENST00000365155 104 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 RNU6-38P-201ENST00000384085 107 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 SNORA75-201ENST00000384158 137 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
TREX1Q9NSU2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
TREX1Q9NSU2 MIR450B-201ENST00000401182 78 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 AL049545.1-201ENST00000401856 572 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 RNU4-55P-201ENST00000410731 137 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.87□□□□□ -2.27
TREX1Q9NSU2 AC008134.1-201ENST00000420943 193 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.87□□□□□ -2.27
TREX1Q9NSU2 AL606517.2-201ENST00000442855 241 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 SNORD116-28-201ENST00000516123 91 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 SNORA40.12-201ENST00000516329 111 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.87□□□□□ -2.27
TREX1Q9NSU2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.87□□□□□ -2.27
TREX1Q9NSU2 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.87□□□□□ -2.27
TREX1Q9NSU2 FAM71BP1-201ENST00000604431 523 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 AL022345.2-201ENST00000606307 135 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 MIR8076-201ENST00000611401 83 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 AL021879.1-201ENST00000611756 288 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 AL359075.3-201ENST00000613288 217 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 Z69908.1-201ENST00000622603 247 ntBASIC0.87□□□□□ -2.27
TREX1Q9NSU2 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.87□□□□□ -2.27
TREX1Q9NSU2 RNU6-1031P-201ENST00000384773 107 ntBASIC0.86□□□□□ -2.27
TREX1Q9NSU2 RNU6-1186P-201ENST00000410429 97 ntBASIC0.86□□□□□ -2.27
TREX1Q9NSU2 AC016909.1-201ENST00000415916 166 ntBASIC0.86□□□□□ -2.27
TREX1Q9NSU2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.86□□□□□ -2.27
TREX1Q9NSU2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.86□□□□□ -2.27
TREX1Q9NSU2 AC005002.2-201ENST00000438228 269 ntBASIC0.86□□□□□ -2.27
TREX1Q9NSU2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.86□□□□□ -2.27
TREX1Q9NSU2 RPL23AP75-201ENST00000491601 451 ntBASIC0.86□□□□□ -2.27
TREX1Q9NSU2 MTCO1P29-201ENST00000496868 288 ntBASIC0.86□□□□□ -2.27
TREX1Q9NSU2 HMGB1P29-201ENST00000505659 499 ntBASIC0.86□□□□□ -2.27
TREX1Q9NSU2 AC025647.1-201ENST00000517879 253 ntBASIC0.86□□□□□ -2.27
TREX1Q9NSU2 CYCSP23-201ENST00000519781 313 ntBASIC0.86□□□□□ -2.27
TREX1Q9NSU2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.86□□□□□ -2.27
TREX1Q9NSU2 AC119751.7-201ENST00000600494 245 ntBASIC0.86□□□□□ -2.27
TREX1Q9NSU2 AC092807.2-201ENST00000609367 243 ntBASIC0.86□□□□□ -2.27
TREX1Q9NSU2 RN7SKP200-201ENST00000410564 320 ntBASIC0.85□□□□□ -2.27
TREX1Q9NSU2 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.85□□□□□ -2.27
TREX1Q9NSU2 MTCO2P16-201ENST00000436962 677 ntBASIC0.85□□□□□ -2.27
TREX1Q9NSU2 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
TREX1Q9NSU2 Y_RNA.654-201ENST00000497848 106 ntBASIC0.85□□□□□ -2.27
TREX1Q9NSU2 SNORA31.10-201ENST00000516482 106 ntBASIC0.85□□□□□ -2.27
TREX1Q9NSU2 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.85□□□□□ -2.27
TREX1Q9NSU2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.85□□□□□ -2.27
TREX1Q9NSU2 MIR3973-201ENST00000579824 107 ntBASIC0.85□□□□□ -2.27
TREX1Q9NSU2 MIR6857-201ENST00000613267 93 ntBASIC0.85□□□□□ -2.27
TREX1Q9NSU2 AC027335.2-201ENST00000624030 375 ntBASIC0.85□□□□□ -2.27
TREX1Q9NSU2 OR4G1P-203ENST00000641984 1631 ntBASIC0.85□□□□□ -2.27
TREX1Q9NSU2 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
TREX1Q9NSU2 RNU1-93P-201ENST00000364704 169 ntBASIC0.84□□□□□ -2.27
TREX1Q9NSU2 Y_RNA.409-201ENST00000383990 98 ntBASIC0.84□□□□□ -2.27
TREX1Q9NSU2 SNORA67.2-201ENST00000384300 149 ntBASIC0.84□□□□□ -2.27
TREX1Q9NSU2 RNU6-784P-201ENST00000384330 106 ntBASIC0.84□□□□□ -2.27
TREX1Q9NSU2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TREX1Q9NSU2 POLR2J4-204ENST00000418424 324 ntBASIC0.84□□□□□ -2.27
TREX1Q9NSU2 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.84□□□□□ -2.27
TREX1Q9NSU2 RNU6-221P-201ENST00000459541 99 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms