Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL356292.1-201ENST00000283110 373 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 MIR372-201ENST00000362225 67 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 SNORD45.3-201ENST00000363836 72 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 RNY3P5-201ENST00000384127 102 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 RPL21P3-201ENST00000395517 478 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 RNU6-1077P-201ENST00000410506 102 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 Y_RNA.625-201ENST00000411256 107 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 DBIP2-201ENST00000419076 262 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.37□□□□□ -1.87
SSU72Q9NP77 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.37□□□□□ -1.87
SSU72Q9NP77 AC016717.1-201ENST00000448918 286 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 RPS27P1-201ENST00000450552 247 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 U3.44-201ENST00000458938 192 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 RNU7-107P-201ENST00000459121 61 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 RNU6-221P-201ENST00000459541 99 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 SNRPGP3-201ENST00000469405 227 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 RPS26P55-201ENST00000471178 356 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 RPL36AP21-201ENST00000490372 323 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 AL031274.2-201ENST00000599419 203 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 AC011603.4-201ENST00000611325 277 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 U4.6-201ENST00000621618 127 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.37□□□□□ -1.87
SSU72Q9NP77 AC006111.3-201ENST00000622137 383 ntBASIC3.37□□□□□ -1.87
SSU72Q9NP77 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.37□□□□□ -1.87
SSU72Q9NP77 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.37□□□□□ -1.87
SSU72Q9NP77 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSU72Q9NP77 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SSU72Q9NP77 SPRR2C-201ENST00000290702 219 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 RNU6-975P-201ENST00000384296 105 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 AL512604.1-201ENST00000404812 257 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 Y_RNA.622-201ENST00000411091 108 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 SNORD105B-201ENST00000458770 79 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 AC010598.1-201ENST00000510378 103 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 RNU6-63P-201ENST00000516690 95 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 SNORA70.18-201ENST00000516696 98 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 RNU2-56P-201ENST00000516826 190 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.36□□□□□ -1.87
SSU72Q9NP77 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.36□□□□□ -1.87
SSU72Q9NP77 POLR3GP1-201ENST00000594073 261 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 AC008739.2-201ENST00000597006 317 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 AL021707.8-201ENST00000609428 183 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
SSU72Q9NP77 snoZ196.1-201ENST00000625269 89 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 MIR7641-1-201ENST00000627518 61 ntBASIC3.36□□□□□ -1.87
SSU72Q9NP77 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSU72Q9NP77 AL391516.1-201ENST00000554380 2449 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.35□□□□□ -1.87
SSU72Q9NP77 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSU72Q9NP77 RNU6-834P-201ENST00000362367 110 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 RNA5SP51-201ENST00000364750 119 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 RNU6-1336P-201ENST00000383886 109 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 RNU6-1274P-201ENST00000384557 107 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 Y_RNA.521-201ENST00000384560 114 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 MIR29B2-201ENST00000385055 81 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 MIR300-201ENST00000401138 83 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 RN7SKP156-201ENST00000410308 342 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 RN7SKP101-201ENST00000411376 320 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 RPL32P35-201ENST00000415214 394 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 ARF4P2-201ENST00000430209 526 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 RPS27P26-201ENST00000494583 239 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 AP001328.1-201ENST00000528550 176 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 AC120024.3-201ENST00000603167 156 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 AC005972.2-201ENST00000604690 348 ntBASIC3.35□□□□□ -1.87
SSU72Q9NP77 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SSU72Q9NP77 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SSU72Q9NP77 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSU72Q9NP77 RNU6-674P-201ENST00000363831 107 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 Y_RNA.294-201ENST00000364916 102 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 RNU6-117P-201ENST00000365415 107 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 RNU6-597P-201ENST00000365620 102 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 RNU6-429P-201ENST00000384582 108 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 SNORA75.5-201ENST00000391291 81 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 AL135786.1-201ENST00000415892 214 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 CST9LP2-201ENST00000437612 320 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 AC008155.2-201ENST00000464337 397 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 AC010531.2-201ENST00000465012 153 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.34□□□□□ -1.87
SSU72Q9NP77 SCARNA17.1-201ENST00000516211 143 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 SCARNA17.2-201ENST00000516334 143 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 AC109329.2-201ENST00000519658 482 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 AC103810.1-201ENST00000579873 453 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.34□□□□□ -1.87
SSU72Q9NP77 SCARNA17.4-201ENST00000614296 143 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 AC090517.3-201ENST00000625170 141 ntBASIC3.34□□□□□ -1.87
SSU72Q9NP77 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSU72Q9NP77 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.34□□□□□ -1.87
SSU72Q9NP77 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
SSU72Q9NP77 AL035425.3-201ENST00000564206 4996 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SSU72Q9NP77 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SSU72Q9NP77 MAPK10-322ENST00000641485 4530 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSU72Q9NP77 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSU72Q9NP77 RNU6-234P-201ENST00000365229 104 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 RNU2-52P-201ENST00000410680 190 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 AC016909.1-201ENST00000415916 166 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SSU72Q9NP77 AC010154.1-201ENST00000425857 269 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms