Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL356320.1-201ENST00000429616 163 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.21□□□□□ -2.06
PCDH9Q9HC56 AC112492.4-201ENST00000456549 352 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.21□□□□□ -2.06
PCDH9Q9HC56 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.21□□□□□ -2.06
PCDH9Q9HC56 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.21□□□□□ -2.06
PCDH9Q9HC56 AL442163.3-201ENST00000554110 156 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.21□□□□□ -2.06
PCDH9Q9HC56 AC125232.2-201ENST00000592457 143 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 AC008737.2-201ENST00000599446 118 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 MZT1P2-201ENST00000604387 248 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.21□□□□□ -2.06
PCDH9Q9HC56 TCL6_2.1-201ENST00000615162 119 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 MIR6873-201ENST00000622788 63 ntBASIC2.21□□□□□ -2.06
PCDH9Q9HC56 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
PCDH9Q9HC56 Y_RNA.179-201ENST00000363844 90 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 SNORA63C-201ENST00000364578 129 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 RNU6-318P-201ENST00000384283 103 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PCDH9Q9HC56 RNA5SP213-201ENST00000391031 106 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 RNU6-823P-201ENST00000391042 103 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 AC004866.1-201ENST00000411748 78 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 Z98742.3-201ENST00000418637 326 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 AC003685.2-201ENST00000422795 395 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.2□□□□□ -2.06
PCDH9Q9HC56 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.2□□□□□ -2.06
PCDH9Q9HC56 RNU6-717P-201ENST00000459076 104 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 AC025033.1-201ENST00000463883 194 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 RPS23P5-201ENST00000495419 428 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 RNU6-475P-201ENST00000516073 104 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 RNU6-911P-201ENST00000516523 104 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 RNU6-1098P-201ENST00000516772 96 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 RNU1-117P-201ENST00000517041 158 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 MIR2355-201ENST00000517199 87 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.2□□□□□ -2.06
PCDH9Q9HC56 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.2□□□□□ -2.06
PCDH9Q9HC56 AC010999.1-201ENST00000611856 324 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 AC011476.5-201ENST00000615594 130 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 AC131280.1-202ENST00000624067 4211 ntBASIC2.2□□□□□ -2.06
PCDH9Q9HC56 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.2□□□□□ -2.06
PCDH9Q9HC56 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.19□□□□□ -2.06
PCDH9Q9HC56 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCDH9Q9HC56 Y_RNA.455-201ENST00000384230 98 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 SNORA3.2-201ENST00000408221 125 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 SNORD12B-201ENST00000410433 91 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCDH9Q9HC56 CBX3P6-201ENST00000430257 527 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 RPL23AP7-203ENST00000449021 469 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 AL021397.1-201ENST00000451806 248 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 RNU7-14P-201ENST00000459331 62 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 AC010469.2-201ENST00000496412 480 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDH9Q9HC56 RNU6-764P-201ENST00000516396 105 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 AC026470.2-201ENST00000561492 181 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.19□□□□□ -2.06
PCDH9Q9HC56 MIR1248-201ENST00000629190 106 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
PCDH9Q9HC56 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCDH9Q9HC56 MTND5P35-201ENST00000557537 1720 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 Y_RNA.27-201ENST00000362540 103 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 RNU6-234P-201ENST00000365229 104 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 RNU6-793P-201ENST00000384233 104 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 Y_RNA.459-201ENST00000384251 102 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 RNU6-738P-201ENST00000384531 106 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 MIR329-1-201ENST00000385028 80 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 MIR561-201ENST00000385216 97 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 U3.40-201ENST00000408706 208 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 SNORA11.4-201ENST00000408823 129 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 RNU6-985P-201ENST00000410182 104 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 RNA5SP425-201ENST00000410336 112 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.18□□□□□ -2.06
PCDH9Q9HC56 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.18□□□□□ -2.06
PCDH9Q9HC56 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 AC091179.3-201ENST00000474761 144 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 Y_RNA.721-201ENST00000517207 102 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 RRN3P3-201ENST00000549207 578 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.18□□□□□ -2.06
PCDH9Q9HC56 MIR1273D-201ENST00000577266 86 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 AL390123.1-201ENST00000603216 237 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 AC116312.1-201ENST00000606841 314 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 PART1_1.1-201ENST00000611761 217 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 U6.92-201ENST00000636464 89 ntBASIC2.18□□□□□ -2.06
PCDH9Q9HC56 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.18□□□□□ -2.06
PCDH9Q9HC56 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDH9Q9HC56 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PCDH9Q9HC56 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDH9Q9HC56 RNU6-545P-201ENST00000362681 104 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 RNU6-245P-201ENST00000384020 107 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 Y_RNA.471-201ENST00000384312 102 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 Y_RNA.526-201ENST00000384572 110 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 Y_RNA.595-201ENST00000410403 105 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 DPH3P2-201ENST00000422618 250 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 MTATP8P1-201ENST00000467115 207 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 RPS27P21-201ENST00000486977 252 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 RNU6-397P-201ENST00000516226 104 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 Y_RNA.683-201ENST00000516508 93 ntBASIC2.17□□□□□ -2.06
PCDH9Q9HC56 SNORA48.11-201ENST00000517015 89 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms