Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP9-4Q9BYQ2 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP9-4Q9BYQ2 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP9-4Q9BYQ2 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP9-4Q9BYQ2 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP9-4Q9BYQ2 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
KRTAP9-4Q9BYQ2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
KRTAP9-4Q9BYQ2 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP9-4Q9BYQ2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
KRTAP9-4Q9BYQ2 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 NACA-203ENST00000454682 6629 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNA5SP383-201ENST00000362934 120 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU6-396P-201ENST00000365369 105 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU1-84P-201ENST00000365447 164 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU1-46P-201ENST00000384425 164 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 MT-TY-201ENST00000387409 66 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIR1282-201ENST00000408865 101 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC018645.1-201ENST00000505003 109 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 SNORA58-201ENST00000505219 137 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU1-41P-201ENST00000516161 162 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU6-1262P-201ENST00000516217 96 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 SNORD63.2-201ENST00000516303 64 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU1-48P-201ENST00000516400 162 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 AL049872.1-201ENST00000556323 322 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 RN7SL230P-201ENST00000580835 303 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC012368.3-201ENST00000604190 219 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 SNORA74.4-201ENST00000607595 199 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 uc_338.6-201ENST00000613544 171 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIR6778-201ENST00000617912 73 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 UCA1.1-201ENST00000620952 75 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 AL513423.1-201ENST00000621695 132 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIR1910-201ENST00000636955 80 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 LINC02471-203ENST00000641941 4752 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 ZNF658B-202ENST00000615961 3375 ntBASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP9-4Q9BYQ2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNA5SP350-201ENST00000363298 111 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU1-24P-201ENST00000364285 165 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU6-361P-201ENST00000364454 107 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNA5SP512-201ENST00000364550 120 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 SNORA64.3-201ENST00000365647 134 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIR1255B2-201ENST00000408618 67 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 AL591806.2-201ENST00000433122 173 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 AL162591.2-201ENST00000449634 317 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIR18B-201ENST00000454574 71 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 RNU7-154P-201ENST00000516194 62 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIR5095-201ENST00000578844 88 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 RN7SL753P-201ENST00000581238 290 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 AL355297.2-201ENST00000604792 129 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 LINC00901.1-201ENST00000617252 152 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 MIR6861-201ENST00000618657 64 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 5S_rRNA.29-201ENST00000641250 107 ntBASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP9-4Q9BYQ2 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 233.6 ms