Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 Z92545.1-201ENST00000411782 234 ntBASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 MTCO1P5-201ENST00000433573 344 ntBASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 RPS4XP2-201ENST00000458402 793 ntBASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 RPS27P29-201ENST00000463110 252 ntBASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 RNU6-1023P-201ENST00000516137 106 ntBASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 RNU6-966P-201ENST00000516479 104 ntBASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 SNORA70.19-201ENST00000516717 90 ntBASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 AC087441.2-201ENST00000529141 262 ntBASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 MIR3145-201ENST00000580727 82 ntBASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 AL031274.2-201ENST00000599419 203 ntBASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 BX284668.6-201ENST00000606899 438 ntBASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
TRAIPQ9BWF2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 SNORD27-201ENST00000363981 72 ntBASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 RNU1-109P-201ENST00000383960 147 ntBASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 NDUFB4P4-201ENST00000404822 243 ntBASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 MIR1262-201ENST00000408276 93 ntBASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 AC006028.1-201ENST00000438379 402 ntBASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 RNU1-131P-201ENST00000458943 161 ntBASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 AC021205.2-201ENST00000480069 347 ntBASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 AC091959.1-201ENST00000495857 238 ntBASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 Y_RNA.673-201ENST00000516306 88 ntBASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 AL137100.2-201ENST00000555786 315 ntBASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
TRAIPQ9BWF2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 Y_RNA.418-201ENST00000384029 102 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 RNU1-148P-201ENST00000384472 162 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 AL603910.2-201ENST00000407268 136 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 RNU6-847P-201ENST00000411115 108 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 HMGN2P34-201ENST00000437647 269 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 AC025750.2-201ENST00000442609 450 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 RPS27P22-201ENST00000478056 241 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 RN7SL504P-201ENST00000494496 287 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 SNORA27.4-201ENST00000516650 95 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 AC005828.6-201ENST00000606610 232 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 AC017071.1-201ENST00000564407 2204 ntBASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TRAIPQ9BWF2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 RNU6-23P-201ENST00000363283 107 ntBASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 Y_RNA.552-201ENST00000384665 112 ntBASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 AL121890.1-201ENST00000435457 205 ntBASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 AC109925.1-201ENST00000478069 331 ntBASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 SUMO2P18-201ENST00000518873 252 ntBASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 MIR4325-201ENST00000583049 90 ntBASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TRAIPQ9BWF2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 VTRNA1-1-201ENST00000363120 99 ntBASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 SNORA48.2-201ENST00000390926 124 ntBASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 RNU6-855P-201ENST00000410395 104 ntBASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 RPL23AP67-201ENST00000465341 474 ntBASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 RN7SL636P-201ENST00000497504 294 ntBASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 Y_RNA.679-201ENST00000516416 91 ntBASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 RNA5SP137-201ENST00000516833 135 ntBASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 AC009127.3-201ENST00000570531 403 ntBASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAIPQ9BWF2 AL513302.2-201ENST00000562313 1842 ntBASIC3.6□□□□□ -1.83
TRAIPQ9BWF2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRAIPQ9BWF2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAIPQ9BWF2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAIPQ9BWF2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAIPQ9BWF2 SNORA27.1-201ENST00000362604 124 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms