Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
LITAFQ99732 HMGN2P18-201ENST00000450680 270 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 AC016925.1-201ENST00000458303 298 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 AC114982.1-201ENST00000469402 321 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.86□□□□□ -2.11
LITAFQ99732 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.86□□□□□ -2.11
LITAFQ99732 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.86□□□□□ -2.11
LITAFQ99732 AC090616.3-201ENST00000582184 217 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 AL355297.2-201ENST00000604792 129 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 AL121772.2-201ENST00000614331 297 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.86□□□□□ -2.11
LITAFQ99732 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
LITAFQ99732 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
LITAFQ99732 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.86□□□□□ -2.11
LITAFQ99732 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
LITAFQ99732 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LITAFQ99732 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LITAFQ99732 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.82-201ENST00000363000 102 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.92-201ENST00000363043 102 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.122-201ENST00000363331 96 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.200-201ENST00000364018 102 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.217-201ENST00000364214 105 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.235-201ENST00000364412 102 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.306-201ENST00000365015 102 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.312-201ENST00000365089 102 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.322-201ENST00000365151 102 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 RNU6-662P-201ENST00000384253 104 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 RNU6-1289P-201ENST00000384431 106 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 MIR627-201ENST00000384979 97 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 MIR218-2-201ENST00000385006 110 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.590-201ENST00000410140 107 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 RN7SKP202-201ENST00000410439 330 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 RNU2-48P-201ENST00000410694 191 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 RNU2-61P-201ENST00000411069 191 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 RNU2-64P-201ENST00000411315 191 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC1.85□□□□□ -2.11
LITAFQ99732 AC074290.1-201ENST00000448883 135 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 AC016717.1-201ENST00000448918 286 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.650-201ENST00000459002 102 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.641-201ENST00000459414 105 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 snoU13.22-201ENST00000459428 104 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 RPL7P49-201ENST00000471402 708 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 RPL21P129-201ENST00000491732 478 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.777-201ENST00000516982 102 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 RNA5SP490-201ENST00000517141 136 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 RNA5SP402-201ENST00000517148 110 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 PRELID2P1-201ENST00000552837 301 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.85□□□□□ -2.11
LITAFQ99732 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.85□□□□□ -2.11
LITAFQ99732 MIR4282-201ENST00000583613 67 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 MIR3922-201ENST00000585192 84 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.771-201ENST00000598668 102 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 AC005828.6-201ENST00000606610 232 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 Y_RNA.789-201ENST00000622480 102 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 AL034408.1-202ENST00000636088 415 ntBASIC1.85□□□□□ -2.11
LITAFQ99732 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
LITAFQ99732 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
LITAFQ99732 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LITAFQ99732 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.84□□□□□ -2.11
LITAFQ99732 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
LITAFQ99732 RNU6-743P-201ENST00000364151 106 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 Y_RNA.274-201ENST00000364714 101 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 RNA5SP125-201ENST00000364843 120 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 Y_RNA.361-201ENST00000365515 120 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 RNU6-438P-201ENST00000365561 103 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 SNORD14D-201ENST00000384390 87 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 MIR561-201ENST00000385216 97 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 RNU6-1248P-201ENST00000391096 64 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 AL357139.1-201ENST00000407792 426 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 MIR1298-201ENST00000408783 112 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 MTND5P15-201ENST00000434246 349 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 AL445687.1-201ENST00000439946 251 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.84□□□□□ -2.11
LITAFQ99732 RNU6-221P-201ENST00000459541 99 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 SNORD116-28-201ENST00000516123 91 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 Y_RNA.679-201ENST00000516416 91 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 SNORA31.15-201ENST00000516771 132 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.84□□□□□ -2.11
LITAFQ99732 ZNF861P-201ENST00000588126 639 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 AL137847.3-201ENST00000611521 109 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 snoZ196.1-201ENST00000625269 89 ntBASIC1.84□□□□□ -2.11
LITAFQ99732 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
LITAFQ99732 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.84□□□□□ -2.12
LITAFQ99732 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.84□□□□□ -2.12
LITAFQ99732 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
LITAFQ99732 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1.83□□□□□ -2.12
LITAFQ99732 RNA5SP124-201ENST00000362739 110 ntBASIC1.83□□□□□ -2.12
LITAFQ99732 RNU1-33P-201ENST00000364249 162 ntBASIC1.83□□□□□ -2.12
LITAFQ99732 Y_RNA.292-201ENST00000364904 97 ntBASIC1.83□□□□□ -2.12
LITAFQ99732 RNY4P28-201ENST00000365281 93 ntBASIC1.83□□□□□ -2.12
LITAFQ99732 RNU6-418P-201ENST00000384035 107 ntBASIC1.83□□□□□ -2.12
LITAFQ99732 RN7SKP220-201ENST00000410611 288 ntBASIC1.83□□□□□ -2.12
LITAFQ99732 RNU6-57P-201ENST00000411348 103 ntBASIC1.83□□□□□ -2.12
LITAFQ99732 AC024067.1-201ENST00000426199 223 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms