Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RPL23AP67-201ENST00000465341 474 ntBASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 AC107027.2-201ENST00000512197 115 ntBASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 RNA5SP356-201ENST00000515972 94 ntBASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 RNU2-44P-201ENST00000516795 194 ntBASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 AC022616.8-201ENST00000533569 253 ntBASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SYNGAP1Q96PV0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
SYNGAP1Q96PV0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SYNGAP1Q96PV0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SYNGAP1Q96PV0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.71□□□□□ -1.82
SYNGAP1Q96PV0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SYNGAP1Q96PV0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.71□□□□□ -1.82
SYNGAP1Q96PV0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SYNGAP1Q96PV0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.71□□□□□ -1.82
SYNGAP1Q96PV0 AC017071.1-201ENST00000564407 2204 ntBASIC3.71□□□□□ -1.82
SYNGAP1Q96PV0 MIR30E-201ENST00000362104 92 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 Y_RNA.261-201ENST00000364631 102 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 Y_RNA.341-201ENST00000365341 102 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-748P-201ENST00000384648 107 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 HSPE1P26-201ENST00000405341 275 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC004866.1-201ENST00000411748 78 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC006461.1-201ENST00000412637 326 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 RPL30P13-201ENST00000418873 348 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC008267.6-201ENST00000441664 139 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-1211P-201ENST00000459179 105 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 snoU13.26-201ENST00000459452 105 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC021205.2-201ENST00000480069 347 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 RPL23AP70-201ENST00000483361 460 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC010409.1-201ENST00000487382 476 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-991P-201ENST00000516168 107 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-971P-201ENST00000516920 106 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 MIR4431-201ENST00000579990 94 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 Y_RNA.802-201ENST00000614892 130 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC002076.2-201ENST00000617362 122 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC068205.3-201ENST00000636385 468 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AL021368.2-201ENST00000606125 5352 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 RNU1-75P-201ENST00000347264 129 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-103P-201ENST00000363686 107 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 snoU2_19.4-201ENST00000364329 80 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-710P-201ENST00000410424 105 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC126124.2-201ENST00000413542 321 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AL513477.1-202ENST00000417061 214 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 CYCSP48-201ENST00000417124 323 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC245047.8-201ENST00000456455 284 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC146507.2-201ENST00000460608 476 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 SNRPGP3-201ENST00000469405 227 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AL359881.1-201ENST00000602916 267 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 MIR6076-201ENST00000617521 113 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AC008873.1-201ENST00000625051 138 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 AL137790.1-201ENST00000634283 177 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 MIR7153-201ENST00000637758 57 ntBASIC3.7□□□□□ -1.82
SYNGAP1Q96PV0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 snoU2_19.1-201ENST00000362361 80 ntBASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 SNORD115-30-201ENST00000364117 82 ntBASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 SNORA70B-201ENST00000384210 135 ntBASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 AL365496.1-201ENST00000426885 215 ntBASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 AL135790.2-201ENST00000437701 267 ntBASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 AL121914.1-201ENST00000450188 156 ntBASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 AC112771.1-201ENST00000463581 102 ntBASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-344P-201ENST00000516635 111 ntBASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 MIR3658-201ENST00000636291 56 ntBASIC3.69□□□□□ -1.82
SYNGAP1Q96PV0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 RNU4-15P-201ENST00000362613 141 ntBASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-899P-201ENST00000363947 107 ntBASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-969P-201ENST00000383900 105 ntBASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 SNORD20-201ENST00000384550 80 ntBASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 MIR626-201ENST00000385032 94 ntBASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 Y_RNA.629-201ENST00000411368 105 ntBASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 RNU6-453P-201ENST00000516819 85 ntBASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 AC107934.2-201ENST00000518653 310 ntBASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 AP000867.2-201ENST00000532468 320 ntBASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 DNAJC19P2-201ENST00000593340 302 ntBASIC3.68□□□□□ -1.82
SYNGAP1Q96PV0 AL078604.3-201ENST00000615580 211 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms