Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 U3.9-201ENST00000363823 204 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 Y_RNA.180-201ENST00000363867 113 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 Y_RNA.235-201ENST00000364412 102 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 Y_RNA.306-201ENST00000365015 102 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 Y_RNA.312-201ENST00000365089 102 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 Y_RNA.322-201ENST00000365151 102 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 Y_RNA.498-201ENST00000384460 102 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 PCNPP3-201ENST00000393579 471 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF31Q96EP0 RPL23AP36-201ENST00000413895 458 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 AL513477.1-202ENST00000417061 214 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.8□□□□□ -1.96
RNF31Q96EP0 AC027124.2-201ENST00000428249 105 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 AC009237.7-201ENST00000447357 229 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 SNORD2.1-201ENST00000458762 69 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 Y_RNA.650-201ENST00000459002 102 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 RPL31P41-201ENST00000477967 372 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 SCARNA17.1-201ENST00000516211 143 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 SCARNA17.2-201ENST00000516334 143 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 RNU6-344P-201ENST00000516635 111 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 SNORA27.4-201ENST00000516650 95 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 Y_RNA.777-201ENST00000516982 102 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.8□□□□□ -1.96
RNF31Q96EP0 Y_RNA.771-201ENST00000598668 102 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 AC037487.3-201ENST00000606668 112 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 SCARNA17.4-201ENST00000614296 143 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 TCL6_2.1-201ENST00000615162 119 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 AC004467.1-201ENST00000615678 330 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 UCA1.1-201ENST00000620952 75 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 Y_RNA.789-201ENST00000622480 102 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RNF31Q96EP0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.8□□□□□ -1.96
RNF31Q96EP0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF31Q96EP0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.8□□□□□ -1.96
RNF31Q96EP0 AL136360.1-201ENST00000503377 1900 ntBASIC2.8□□□□□ -1.96
RNF31Q96EP0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.79□□□□□ -1.96
RNF31Q96EP0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF31Q96EP0 AC108206.1-201ENST00000570186 4159 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RNF31Q96EP0 Y_RNA.199-201ENST00000364014 102 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 SNORA18.2-201ENST00000383865 132 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 SNORA67.2-201ENST00000384300 149 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 Y_RNA.626-201ENST00000411288 95 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 EIF4EP4-201ENST00000424916 578 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 Z98742.2-201ENST00000431564 187 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF31Q96EP0 SUMO1P2-201ENST00000452524 304 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 AL138752.1-201ENST00000452964 351 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 Y_RNA.644-201ENST00000459006 113 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 COX6CP14-201ENST00000469580 174 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF31Q96EP0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.79□□□□□ -1.96
RNF31Q96EP0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF31Q96EP0 Y_RNA.674-201ENST00000516362 113 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 RNU2-12P-201ENST00000517216 168 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF31Q96EP0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF31Q96EP0 MIR3674-201ENST00000636576 68 ntBASIC2.79□□□□□ -1.96
RNF31Q96EP0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF31Q96EP0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF31Q96EP0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF31Q96EP0 AL359854.1-201ENST00000614203 1594 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.78□□□□□ -1.96
RNF31Q96EP0 AC026241.1-201ENST00000517873 2142 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 AC069528.2-201ENST00000624849 1991 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.78□□□□□ -1.96
RNF31Q96EP0 AL035425.3-201ENST00000564206 4996 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 Y_RNA.150-201ENST00000363562 102 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 Y_RNA.217-201ENST00000364214 105 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 RNU6-454P-201ENST00000364292 107 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 SNORD87-201ENST00000364849 89 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 Y_RNA.292-201ENST00000364904 97 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 SNORA72.2-201ENST00000365028 127 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 RNU6-1264P-201ENST00000383891 107 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 SNORA12-201ENST00000391162 147 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 FO393413.1-201ENST00000402892 195 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 MIR320B2-201ENST00000408479 138 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 RNU2-54P-201ENST00000410299 190 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 RNA5SP492-201ENST00000411330 114 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF31Q96EP0 AC097463.2-201ENST00000421074 142 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 AC004386.2-201ENST00000441858 148 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF31Q96EP0 RPS12P18-201ENST00000442381 270 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 Y_RNA.641-201ENST00000459414 105 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.78□□□□□ -1.96
RNF31Q96EP0 SEM1P1-201ENST00000506694 209 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 RN7SKP43-201ENST00000516173 320 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 RNA5SP367-201ENST00000516557 118 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF31Q96EP0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.78□□□□□ -1.96
RNF31Q96EP0 MIR3145-201ENST00000580727 82 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF31Q96EP0 SNORD11B-201ENST00000607707 90 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 MIR622-201ENST00000638396 96 ntBASIC2.78□□□□□ -1.96
RNF31Q96EP0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
RNF31Q96EP0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
RNF31Q96EP0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.77□□□□□ -1.97
RNF31Q96EP0 RNU4-80P-201ENST00000363200 141 ntBASIC2.77□□□□□ -1.97
RNF31Q96EP0 SNORD32B-201ENST00000364460 84 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms