Protein–RNA interactions for Protein: Q92575

UBXN4, UBX domain-containing protein 4, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4Q92575 AC004467.1-201ENST00000615678 330 ntBASIC3.07□□□□□ -1.92
UBXN4Q92575 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBXN4Q92575 MIR422A-201ENST00000362286 90 ntBASIC3.06□□□□□ -1.92
UBXN4Q92575 RNU6-1240P-201ENST00000365155 104 ntBASIC3.06□□□□□ -1.92
UBXN4Q92575 MIR128-1-201ENST00000384921 82 ntBASIC3.06□□□□□ -1.92
UBXN4Q92575 MIR634-201ENST00000385208 97 ntBASIC3.06□□□□□ -1.92
UBXN4Q92575 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBXN4Q92575 ATP5J2P3-201ENST00000451550 258 ntBASIC3.06□□□□□ -1.92
UBXN4Q92575 RN7SL636P-201ENST00000497504 294 ntBASIC3.06□□□□□ -1.92
UBXN4Q92575 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBXN4Q92575 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.06□□□□□ -1.92
UBXN4Q92575 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.06□□□□□ -1.92
UBXN4Q92575 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.06□□□□□ -1.92
UBXN4Q92575 MIR3684-201ENST00000579779 74 ntBASIC3.06□□□□□ -1.92
UBXN4Q92575 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.06□□□□□ -1.92
UBXN4Q92575 AL360085.1-201ENST00000604713 532 ntBASIC3.06□□□□□ -1.92
UBXN4Q92575 MIR622-201ENST00000638396 96 ntBASIC3.06□□□□□ -1.92
UBXN4Q92575 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.06□□□□□ -1.92
UBXN4Q92575 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBXN4Q92575 Y_RNA.143-201ENST00000363520 106 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 Y_RNA.210-201ENST00000364161 110 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 RNU6-738P-201ENST00000384531 106 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 RNU5A-5P-201ENST00000411054 116 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 AL390729.2-201ENST00000416137 156 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 AC005002.2-201ENST00000438228 269 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 AC025750.2-201ENST00000442609 450 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 HMGB3P3-201ENST00000510526 400 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 RNA5SP341-201ENST00000516261 117 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 RNU6-327P-201ENST00000516270 127 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 SCARNA13-201ENST00000516672 275 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 Y_RNA.720-201ENST00000517166 92 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 AC025647.1-201ENST00000517879 253 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 AC009127.3-201ENST00000570531 403 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 MIR3605-201ENST00000583214 100 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 RAC1P9-201ENST00000604990 392 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 AL021879.1-201ENST00000611756 288 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 AC091932.3-201ENST00000624223 323 ntBASIC3.05□□□□□ -1.92
UBXN4Q92575 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBXN4Q92575 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
UBXN4Q92575 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBXN4Q92575 Y_RNA.145-201ENST00000363527 102 ntBASIC3.04□□□□□ -1.92
UBXN4Q92575 SNORA25.6-201ENST00000364121 118 ntBASIC3.04□□□□□ -1.92
UBXN4Q92575 SNORA63C-201ENST00000364578 129 ntBASIC3.04□□□□□ -1.92
UBXN4Q92575 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.04□□□□□ -1.92
UBXN4Q92575 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.04□□□□□ -1.92
UBXN4Q92575 S100A11P2-201ENST00000467589 312 ntBASIC3.04□□□□□ -1.92
UBXN4Q92575 AC011406.1-201ENST00000512440 370 ntBASIC3.04□□□□□ -1.92
UBXN4Q92575 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.04□□□□□ -1.92
UBXN4Q92575 SNORA31.25-201ENST00000517242 134 ntBASIC3.04□□□□□ -1.92
UBXN4Q92575 MIR3169-201ENST00000578032 83 ntBASIC3.04□□□□□ -1.92
UBXN4Q92575 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
UBXN4Q92575 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.04□□□□□ -1.92
UBXN4Q92575 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBXN4Q92575 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBXN4Q92575 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
UBXN4Q92575 Y_RNA.183-201ENST00000363882 113 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 Y_RNA.462-201ENST00000384268 102 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 MIR597-201ENST00000384968 97 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 SNORD23.1-201ENST00000408212 104 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 AC060773.1-201ENST00000421698 310 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 MTND2P23-201ENST00000422990 651 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.03□□□□□ -1.92
UBXN4Q92575 HMGN2P34-201ENST00000437647 269 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 AL353689.1-201ENST00000438895 199 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 AC073910.1-201ENST00000445047 438 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 RNU6-1041P-201ENST00000516254 102 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 RNU6-1045P-201ENST00000516321 107 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.03□□□□□ -1.92
UBXN4Q92575 AC007229.1-201ENST00000590455 412 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 AC008737.2-201ENST00000599446 118 ntBASIC3.03□□□□□ -1.92
UBXN4Q92575 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
UBXN4Q92575 AL365361.1-201ENST00000566942 3481 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
UBXN4Q92575 MIR22-201ENST00000362190 85 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 RNU6-1175P-201ENST00000365200 107 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 RNU6-21P-201ENST00000384710 107 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 RNU6-130P-201ENST00000411112 103 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 HMGN2P3-201ENST00000433603 273 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 HMGN2P5-201ENST00000436882 273 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 AC011753.1-201ENST00000451001 220 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.02□□□□□ -1.93
UBXN4Q92575 AL049873.1-201ENST00000480540 376 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 MRPS35P2-201ENST00000508242 191 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 RNU7-110P-201ENST00000516891 62 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 RNU6-897P-201ENST00000517135 105 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.02□□□□□ -1.93
UBXN4Q92575 AP002001.1-203ENST00000534002 267 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 UBL5P2-201ENST00000583788 219 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 AC005786.1-201ENST00000588553 154 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 AC011373.1-201ENST00000607270 237 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 MIR376A1-201ENST00000616574 68 ntBASIC3.02□□□□□ -1.93
UBXN4Q92575 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
UBXN4Q92575 RNU6-937P-201ENST00000384325 106 ntBASIC3.01□□□□□ -1.93
UBXN4Q92575 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.01□□□□□ -1.93
UBXN4Q92575 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.01□□□□□ -1.93
UBXN4Q92575 RNY3P15-201ENST00000516297 97 ntBASIC3.01□□□□□ -1.93
UBXN4Q92575 AC116312.1-201ENST00000606841 314 ntBASIC3.01□□□□□ -1.93
UBXN4Q92575 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.01□□□□□ -1.93
UBXN4Q92575 AC012640.5-201ENST00000623897 319 ntBASIC3.01□□□□□ -1.93
UBXN4Q92575 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms