Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MAPK10-266ENST00000641066 6555 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.16-201ENST00000362421 102 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 MIR9-1-201ENST00000385198 89 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 MIR548H3-201ENST00000408771 118 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 RNA5SP504-201ENST00000410676 117 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 COTL1P1-201ENST00000422309 375 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 AC023141.11-201ENST00000508864 202 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 MTND1P19-201ENST00000511780 315 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 RNU6-1023P-201ENST00000516137 106 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 RNU1-117P-201ENST00000517041 158 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 RNU6-794P-201ENST00000517261 64 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 MIR3128-201ENST00000581957 66 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 MIR5092-201ENST00000583139 88 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 SCARNA15.3-201ENST00000626315 122 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 SCARNA4.1-201ENST00000628597 123 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 MIR410-201ENST00000362222 80 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.60-201ENST00000362831 98 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.111-201ENST00000363248 100 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.286-201ENST00000364813 102 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 SNORD87-201ENST00000364849 89 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 SNORA72.2-201ENST00000365028 127 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 RNU6-1264P-201ENST00000383891 107 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 MIR1294-201ENST00000408503 142 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 MTND4LP30-201ENST00000454092 297 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 AC107222.1-201ENST00000510899 637 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 AC018630.3-201ENST00000542637 96 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 AC055872.1-201ENST00000570978 278 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 LARP7P3-201ENST00000579888 337 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 AC022441.3-201ENST00000605737 136 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 AC008873.1-201ENST00000625051 138 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 MIR3674-201ENST00000636576 68 ntBASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.331-201ENST00000365267 102 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 RNU6-1310P-201ENST00000384153 107 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 SNORA67.2-201ENST00000384300 149 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.477-201ENST00000384352 108 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.478-201ENST00000384358 107 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 FO393413.1-201ENST00000402892 195 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 RPL23AP36-201ENST00000413895 458 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 Z82209.1-201ENST00000422141 2135 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 AP001486.1-201ENST00000463339 476 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 AC090515.1-201ENST00000465295 476 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 AL049873.1-201ENST00000480540 376 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 HMGB3P17-201ENST00000504195 649 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 RNU5F-4P-201ENST00000516581 114 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 RNU6-1098P-201ENST00000516772 96 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 RNU6-388P-201ENST00000517012 105 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 RNU6-389P-201ENST00000517048 105 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 AP002001.1-203ENST00000534002 267 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 EIF4BP1-201ENST00000554881 351 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 AC005357.1-201ENST00000588399 301 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 MIR5739-201ENST00000619803 80 ntBASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ATG4AQ8WYN0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 MIR6073-201ENST00000352083 89 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.416-201ENST00000384014 113 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 SNORA53-201ENST00000391141 249 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 AL139095.1-201ENST00000404326 391 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 RNU2-52P-201ENST00000410680 190 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 AC005042.3-201ENST00000453230 174 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 SERF1AP1-201ENST00000514575 187 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 MIR449C-201ENST00000516047 92 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 RNU6-107P-201ENST00000516643 102 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 MIR3668-201ENST00000582138 75 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 AL109918.3-201ENST00000603072 338 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 AC004467.1-201ENST00000615678 330 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 AL590240.4-201ENST00000616908 390 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 AC010297.1-201ENST00000623948 149 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 AC091932.3-201ENST00000624223 323 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 IGHVIII-44-202ENST00000636235 289 ntBASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.6□□□□□ -1.99
ATG4AQ8WYN0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.101-201ENST00000363154 102 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 RNU6-461P-201ENST00000364195 107 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 SNORA20.1-201ENST00000364790 130 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 RNU6-234P-201ENST00000365229 104 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.352-201ENST00000365439 102 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 RNU6-326P-201ENST00000365480 107 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 MIR95-201ENST00000385072 81 ntBASIC2.59□□□□□ -1.99
ATG4AQ8WYN0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms