Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SIX5Q8N196 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SIX5Q8N196 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.9□□□□□ -1.79
SIX5Q8N196 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SIX5Q8N196 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SIX5Q8N196 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SIX5Q8N196 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SIX5Q8N196 Z82209.1-201ENST00000422141 2135 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX5Q8N196 AC091564.4-201ENST00000533934 2194 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SIX5Q8N196 MIR181A2-201ENST00000384863 110 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SIX5Q8N196 RNU6-437P-201ENST00000459408 95 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 RN7SL271P-201ENST00000487601 295 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 RNU6-1333P-201ENST00000516162 93 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 RNU6-561P-201ENST00000516222 102 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX5Q8N196 MIR3186-201ENST00000577404 85 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 AC013412.1-201ENST00000610687 192 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 U7.8-201ENST00000619968 63 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SIX5Q8N196 AC009487.4-201ENST00000624969 3585 ntBASIC3.89□□□□□ -1.79
SIX5Q8N196 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX5Q8N196 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
SIX5Q8N196 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX5Q8N196 Y_RNA.127-201ENST00000363386 109 ntBASIC3.88□□□□□ -1.79
SIX5Q8N196 AL512604.1-201ENST00000404812 257 ntBASIC3.88□□□□□ -1.79
SIX5Q8N196 AL135786.1-201ENST00000415892 214 ntBASIC3.88□□□□□ -1.79
SIX5Q8N196 RPL23AP58-201ENST00000440453 469 ntBASIC3.88□□□□□ -1.79
SIX5Q8N196 SNORD105B-201ENST00000458770 79 ntBASIC3.88□□□□□ -1.79
SIX5Q8N196 AC080013.2-201ENST00000460866 323 ntBASIC3.88□□□□□ -1.79
SIX5Q8N196 RPL21P10-201ENST00000463521 490 ntBASIC3.88□□□□□ -1.79
SIX5Q8N196 AC008155.2-201ENST00000464337 397 ntBASIC3.88□□□□□ -1.79
SIX5Q8N196 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX5Q8N196 AC023043.3-201ENST00000593113 385 ntBASIC3.88□□□□□ -1.79
SIX5Q8N196 AC011603.4-201ENST00000611325 277 ntBASIC3.88□□□□□ -1.79
SIX5Q8N196 MFSD8-236ENST00000641509 4050 ntBASIC3.87□□□□□ -1.79
SIX5Q8N196 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX5Q8N196 RNU4-41P-201ENST00000364426 143 ntBASIC3.87□□□□□ -1.79
SIX5Q8N196 RNA5SP205-201ENST00000364653 136 ntBASIC3.87□□□□□ -1.79
SIX5Q8N196 SNORD116-14-201ENST00000383894 92 ntBASIC3.87□□□□□ -1.79
SIX5Q8N196 SNORD116-17-201ENST00000383929 92 ntBASIC3.87□□□□□ -1.79
SIX5Q8N196 SNORD116-15-201ENST00000384445 92 ntBASIC3.87□□□□□ -1.79
SIX5Q8N196 SNORD116-19-201ENST00000384729 92 ntBASIC3.87□□□□□ -1.79
SIX5Q8N196 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SIX5Q8N196 RNU1-101P-201ENST00000391171 127 ntBASIC3.87□□□□□ -1.79
SIX5Q8N196 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX5Q8N196 Y_RNA.622-201ENST00000411091 108 ntBASIC3.87□□□□□ -1.79
SIX5Q8N196 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX5Q8N196 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX5Q8N196 RPL23AP94-201ENST00000512518 302 ntBASIC3.87□□□□□ -1.79
SIX5Q8N196 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SIX5Q8N196 MIR4513-201ENST00000581077 86 ntBASIC3.87□□□□□ -1.79
SIX5Q8N196 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SIX5Q8N196 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX5Q8N196 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX5Q8N196 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.87□□□□□ -1.79
SIX5Q8N196 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX5Q8N196 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.86□□□□□ -1.79
SIX5Q8N196 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIX5Q8N196 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX5Q8N196 Y_RNA.71-201ENST00000362892 104 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 Y_RNA.218-201ENST00000364218 104 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 Y_RNA.261-201ENST00000364631 102 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 Y_RNA.393-201ENST00000383936 102 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 RNU6-1235P-201ENST00000384559 107 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 Y_RNA.542-201ENST00000384641 111 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 RNU6-768P-201ENST00000384683 107 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 RNA5SP120-201ENST00000410900 112 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.86□□□□□ -1.79
SIX5Q8N196 AC083863.1-201ENST00000438811 231 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 RPS12P18-201ENST00000442381 270 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 AC016925.1-201ENST00000458303 298 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 RNU6-498P-201ENST00000459468 107 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 RN7SL330P-201ENST00000469709 307 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 RN7SL807P-201ENST00000470923 297 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 RAC1P5-201ENST00000512182 576 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.86□□□□□ -1.79
SIX5Q8N196 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 AC006435.5-201ENST00000624486 112 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 MIR7157-201ENST00000635801 60 ntBASIC3.86□□□□□ -1.79
SIX5Q8N196 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
SIX5Q8N196 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX5Q8N196 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX5Q8N196 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SIX5Q8N196 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX5Q8N196 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SIX5Q8N196 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.85□□□□□ -1.79
SIX5Q8N196 SNORA38.1-201ENST00000364172 131 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 RNU6-1080P-201ENST00000383982 107 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 RNU6-418P-201ENST00000384035 107 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 MIR218-1-201ENST00000384999 110 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 MIR199A2-201ENST00000385289 110 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 RNA5SP496-201ENST00000391240 109 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 SNORA3C-201ENST00000408792 125 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 RNU4-43P-201ENST00000410628 137 ntBASIC3.85□□□□□ -1.79
SIX5Q8N196 CKS1BP2-201ENST00000497342 240 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms