Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.26□□□□□ -1.73
SCUBE3Q8IX30 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SCUBE3Q8IX30 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SCUBE3Q8IX30 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCUBE3Q8IX30 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 Y_RNA.93-201ENST00000363066 109 ntBASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 SNORD24-201ENST00000383884 75 ntBASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 RPS26P48-201ENST00000491713 339 ntBASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 AC141557.1-201ENST00000540982 400 ntBASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 AC084364.2-201ENST00000546924 395 ntBASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 MIR6868-201ENST00000611215 58 ntBASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SCUBE3Q8IX30 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 RNU6-888P-201ENST00000363010 101 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 MIR7-3-201ENST00000384898 110 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 RPS29P21-201ENST00000496272 170 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 MRPS17P9-201ENST00000511924 393 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 RNU6-240P-201ENST00000516098 97 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 RNU1-61P-201ENST00000516107 151 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 RNU7-172P-201ENST00000517125 64 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 RNU6-1270P-201ENST00000517128 108 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 AC109329.2-201ENST00000519658 482 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 uc_338.14-201ENST00000613162 166 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 MIR6875-201ENST00000617506 72 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 UBE3AP2-201ENST00000429033 2259 ntBASIC4.24□□□□□ -1.73
SCUBE3Q8IX30 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 SNORD31B-201ENST00000364977 69 ntBASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 Y_RNA.342-201ENST00000365352 113 ntBASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 SNORD77.3-201ENST00000391113 65 ntBASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 AL133547.1-201ENST00000448546 220 ntBASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 AL162151.2-201ENST00000448875 158 ntBASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 AC026726.1-201ENST00000512859 601 ntBASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 AC097462.1-201ENST00000514125 324 ntBASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 MIR6076-201ENST00000617521 113 ntBASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 AP003122.5-201ENST00000527668 3766 ntBASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCUBE3Q8IX30 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 RNU6-418P-201ENST00000384035 107 ntBASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 RNU6-1235P-201ENST00000384559 107 ntBASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 RPL21P65-201ENST00000406094 466 ntBASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 RNU6-498P-201ENST00000459468 107 ntBASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 NDUFA4P2-201ENST00000489989 244 ntBASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 MIR4438-201ENST00000585271 93 ntBASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 AC013412.1-201ENST00000610687 192 ntBASIC4.22□□□□□ -1.73
SCUBE3Q8IX30 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
SCUBE3Q8IX30 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SCUBE3Q8IX30 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 SNORA63D-201ENST00000364359 132 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 Y_RNA.265-201ENST00000364677 108 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 RNU6-234P-201ENST00000365229 104 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 SNORA9-201ENST00000384215 133 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 RNU6-198P-201ENST00000384258 104 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 AL513477.1-202ENST00000417061 214 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 AC097463.2-201ENST00000421074 142 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 EIF4EP4-201ENST00000424916 578 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 AL445687.1-201ENST00000439946 251 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 RN7SL271P-201ENST00000487601 295 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 RNU6-693P-201ENST00000516134 107 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 RNU6-830P-201ENST00000516353 107 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 AC069240.1-201ENST00000548774 375 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 CR392039.5-201ENST00000623201 510 ntBASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCUBE3Q8IX30 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SCUBE3Q8IX30 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms