Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 RPL39P29-201ENST00000447779 157 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-1211P-201ENST00000459179 105 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 AC009163.5-201ENST00000575421 637 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 MIR4744-201ENST00000581563 82 ntBASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 RNU6-622P-201ENST00000384272 103 ntBASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 SNORA48.8-201ENST00000391324 134 ntBASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 AC019205.3-201ENST00000424573 156 ntBASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 AC146507.2-201ENST00000460608 476 ntBASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 AC090525.1-201ENST00000479116 478 ntBASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 AC083906.5-201ENST00000503722 328 ntBASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 Y_RNA.686-201ENST00000516548 134 ntBASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 AC112693.2-201ENST00000556538 232 ntBASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 DNAJC19P2-201ENST00000593340 302 ntBASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 AL078604.3-201ENST00000615580 211 ntBASIC3.34□□□□□ -1.87
CNKSR3Q6P9H4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
CNKSR3Q6P9H4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 AL391516.1-201ENST00000554380 2449 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 AC093010.3-201ENST00000570269 15214 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 RNU6-245P-201ENST00000384020 107 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 RNA5SP354-201ENST00000391247 136 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 EI24P2-201ENST00000397776 1076 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 MIR513C-201ENST00000401352 84 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 RNA5SP475-201ENST00000410568 110 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 AC105272.1-201ENST00000438604 198 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 AC021205.2-201ENST00000480069 347 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 RPS27P26-201ENST00000494583 239 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 SCARNA8-201ENST00000515924 131 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 RN7SKP164-201ENST00000516138 266 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 AC136628.3-201ENST00000521868 290 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 AC021739.1-201ENST00000559631 174 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 AC090897.2-201ENST00000581715 130 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CNKSR3Q6P9H4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 RNU1-62P-201ENST00000362599 164 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 RNA5SP139-201ENST00000364340 117 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 CD24P4-201ENST00000382840 243 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 Y_RNA.420-201ENST00000384043 110 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 MIR626-201ENST00000385032 94 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 MIR767-201ENST00000390228 109 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 AC245291.1-201ENST00000419501 328 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 HMGN2P10-201ENST00000448085 265 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 RNU7-197P-201ENST00000458836 62 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 AC107027.2-201ENST00000512197 115 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 RNU6-453P-201ENST00000516819 85 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 MIR2276-201ENST00000516886 89 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 AC013412.1-201ENST00000610687 192 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 AC013791.1-201ENST00000616619 62 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 AC110774.1-201ENST00000623567 2018 ntBASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CNKSR3Q6P9H4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 AC134026.1-201ENST00000623249 2239 ntBASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 Y_RNA.172-201ENST00000363765 102 ntBASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 RNU6-324P-201ENST00000363957 106 ntBASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 RNU6-1048P-201ENST00000364054 107 ntBASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 Y_RNA.415-201ENST00000384012 112 ntBASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 RNU2-52P-201ENST00000410680 190 ntBASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 RNA5SP184-201ENST00000411071 108 ntBASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 AL365496.1-201ENST00000426885 215 ntBASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 AC074290.1-201ENST00000448883 135 ntBASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 AC025281.1-201ENST00000567026 265 ntBASIC3.31□□□□□ -1.88
CNKSR3Q6P9H4 MIR4319-201ENST00000577285 85 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms