Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FAM27D1-201ENST00000612308 341 ntBASIC4.59□□□□□ -1.67
VARS2Q5ST30 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC4.59□□□□□ -1.67
VARS2Q5ST30 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VARS2Q5ST30 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.59□□□□□ -1.68
VARS2Q5ST30 MAPK10-304ENST00000641341 3984 ntBASIC4.59□□□□□ -1.68
VARS2Q5ST30 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
VARS2Q5ST30 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
VARS2Q5ST30 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
VARS2Q5ST30 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VARS2Q5ST30 MIR372-201ENST00000362225 67 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 RNU6-1313P-201ENST00000362622 102 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 SNORD115-28-201ENST00000363931 81 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 Y_RNA.205-201ENST00000364128 113 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 Y_RNA.351-201ENST00000365436 96 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 Y_RNA.386-201ENST00000383913 105 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 MIR520G-201ENST00000385064 90 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 SNORD96B-201ENST00000386148 79 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 AL035398.1-201ENST00000430869 322 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 AL161932.1-201ENST00000437408 146 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
VARS2Q5ST30 AL592156.1-201ENST00000508758 304 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 AC140113.4-201ENST00000622087 222 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 AC139713.2-215ENST00000641428 5037 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 ZNF271P-202ENST00000465539 1970 ntBASIC4.58□□□□□ -1.68
VARS2Q5ST30 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VARS2Q5ST30 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VARS2Q5ST30 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.58□□□□□ -1.68
VARS2Q5ST30 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
VARS2Q5ST30 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VARS2Q5ST30 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.57□□□□□ -1.68
VARS2Q5ST30 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VARS2Q5ST30 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.57□□□□□ -1.68
VARS2Q5ST30 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VARS2Q5ST30 FAM35DP-201ENST00000323387 2712 ntBASIC4.57□□□□□ -1.68
VARS2Q5ST30 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VARS2Q5ST30 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VARS2Q5ST30 RNU6-1094P-201ENST00000362416 104 ntBASIC4.57□□□□□ -1.68
VARS2Q5ST30 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.57□□□□□ -1.68
VARS2Q5ST30 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VARS2Q5ST30 RN7SL600P-201ENST00000581811 299 ntBASIC4.57□□□□□ -1.68
VARS2Q5ST30 DLEU2_5.2-201ENST00000610606 84 ntBASIC4.57□□□□□ -1.68
VARS2Q5ST30 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VARS2Q5ST30 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.57□□□□□ -1.68
VARS2Q5ST30 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
VARS2Q5ST30 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VARS2Q5ST30 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VARS2Q5ST30 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VARS2Q5ST30 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VARS2Q5ST30 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VARS2Q5ST30 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VARS2Q5ST30 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.56□□□□□ -1.68
VARS2Q5ST30 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
VARS2Q5ST30 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VARS2Q5ST30 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VARS2Q5ST30 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VARS2Q5ST30 SNORA1.1-201ENST00000364671 133 ntBASIC4.56□□□□□ -1.68
VARS2Q5ST30 Y_RNA.299-201ENST00000364973 94 ntBASIC4.56□□□□□ -1.68
VARS2Q5ST30 AP000567.1-201ENST00000406413 156 ntBASIC4.56□□□□□ -1.68
VARS2Q5ST30 AL117339.2-201ENST00000430475 180 ntBASIC4.56□□□□□ -1.68
VARS2Q5ST30 RNU6-871P-201ENST00000516122 100 ntBASIC4.56□□□□□ -1.68
VARS2Q5ST30 RNU6-948P-201ENST00000516374 107 ntBASIC4.56□□□□□ -1.68
VARS2Q5ST30 RNA5SP73-201ENST00000516744 108 ntBASIC4.56□□□□□ -1.68
VARS2Q5ST30 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.56□□□□□ -1.68
VARS2Q5ST30 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VARS2Q5ST30 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.56□□□□□ -1.68
VARS2Q5ST30 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
VARS2Q5ST30 AC007656.2-201ENST00000624902 4547 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.55□□□□□ -1.68
VARS2Q5ST30 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VARS2Q5ST30 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VARS2Q5ST30 AC010733.2-201ENST00000589496 5702 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VARS2Q5ST30 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VARS2Q5ST30 RNU1-44P-201ENST00000384453 163 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VARS2Q5ST30 RNU6-129P-201ENST00000391022 107 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 AL022718.1-201ENST00000412004 84 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.55□□□□□ -1.68
VARS2Q5ST30 PRSS3P4-201ENST00000453323 162 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 AC099522.1-202ENST00000514718 367 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 RNU7-25P-201ENST00000516544 62 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 AC022655.2-201ENST00000577280 318 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 MIR4458-201ENST00000578872 75 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.55□□□□□ -1.68
VARS2Q5ST30 AC002984.1-201ENST00000591692 448 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 AC078899.2-201ENST00000595282 212 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 AL161756.2-201ENST00000604597 246 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 MIR376B-201ENST00000614515 100 ntBASIC4.55□□□□□ -1.68
VARS2Q5ST30 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.55□□□□□ -1.68
VARS2Q5ST30 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VARS2Q5ST30 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VARS2Q5ST30 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VARS2Q5ST30 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.55□□□□□ -1.68
VARS2Q5ST30 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
VARS2Q5ST30 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VARS2Q5ST30 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VARS2Q5ST30 RNA5SP513-201ENST00000364648 118 ntBASIC4.54□□□□□ -1.68
VARS2Q5ST30 RNU6ATAC-201ENST00000408749 126 ntBASIC4.54□□□□□ -1.68
VARS2Q5ST30 RN7SKP200-201ENST00000410564 320 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms