Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 AC023141.11-201ENST00000508864 202 ntBASIC4.06□□□□□ -1.76
TMEM259Q4ZIN3 AC097462.1-201ENST00000514125 324 ntBASIC4.06□□□□□ -1.76
TMEM259Q4ZIN3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.06□□□□□ -1.76
TMEM259Q4ZIN3 AL021707.8-201ENST00000609428 183 ntBASIC4.06□□□□□ -1.76
TMEM259Q4ZIN3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
TMEM259Q4ZIN3 MIR6500-201ENST00000622700 86 ntBASIC4.06□□□□□ -1.76
TMEM259Q4ZIN3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.06□□□□□ -1.76
TMEM259Q4ZIN3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TMEM259Q4ZIN3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM259Q4ZIN3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM259Q4ZIN3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TMEM259Q4ZIN3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.06□□□□□ -1.76
TMEM259Q4ZIN3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 DYNLT3P1-201ENST00000378574 347 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 RNU6-1336P-201ENST00000383886 109 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 RNU2-52P-201ENST00000410680 190 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 RNU2-70P-201ENST00000410718 179 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 AC123900.1-201ENST00000420390 96 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 MTCO1P44-201ENST00000441935 243 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 AC025750.2-201ENST00000442609 450 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 AL357134.1-201ENST00000445848 426 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 RPS4XP11-201ENST00000446897 772 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 RNU6-991P-201ENST00000516168 107 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 AL606490.9-201ENST00000603331 271 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 MIR6868-201ENST00000611215 58 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 uc_338.4-201ENST00000616635 176 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 MIR7702-201ENST00000621931 59 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 AC034229.5-201ENST00000624258 185 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 AC091152.2-201ENST00000591628 2569 ntBASIC4.05□□□□□ -1.76
TMEM259Q4ZIN3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 SNORA68.1-201ENST00000364537 132 ntBASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 AL159169.1-201ENST00000421119 127 ntBASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 RPS29P7-201ENST00000439662 171 ntBASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 RPL29P14-201ENST00000495837 428 ntBASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 AC011604.1-201ENST00000545978 196 ntBASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 MIR8058-201ENST00000615737 89 ntBASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.04□□□□□ -1.76
TMEM259Q4ZIN3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 RNU1-23P-201ENST00000363361 144 ntBASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 RNU6-484P-201ENST00000384016 107 ntBASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 RNU2-63P-201ENST00000410792 194 ntBASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 AL133162.1-201ENST00000463228 453 ntBASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 RPL21P129-201ENST00000491732 478 ntBASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 AC093259.1-201ENST00000509755 300 ntBASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 RNU7-143P-201ENST00000516781 65 ntBASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 RNU6-1231P-201ENST00000517185 103 ntBASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 AC025627.2-201ENST00000576220 160 ntBASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM259Q4ZIN3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 TNPO1P3-201ENST00000436471 2662 ntBASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 Y_RNA.621-201ENST00000411065 96 ntBASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 CYCSP19-201ENST00000411715 316 ntBASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 HMGN2P34-201ENST00000437647 269 ntBASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 RN7SL93P-201ENST00000463035 293 ntBASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 RN7SL542P-201ENST00000467147 294 ntBASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 RNU6-659P-201ENST00000516454 104 ntBASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 Y_RNA.757-201ENST00000578934 114 ntBASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.02□□□□□ -1.77
TMEM259Q4ZIN3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 AC138915.1-201ENST00000565427 1685 ntBASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 RNU6-1298P-201ENST00000362456 101 ntBASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 RNU7-107P-201ENST00000459121 61 ntBASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 SNORA84-201ENST00000459229 133 ntBASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 RN7SKP179-201ENST00000516126 217 ntBASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 AL160236.1-201ENST00000556317 195 ntBASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 AL355297.2-201ENST00000604792 129 ntBASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4.01□□□□□ -1.77
TMEM259Q4ZIN3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms