Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RBMY2UP-201ENST00000453474 324 ntBASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 AC083906.5-201ENST00000503722 328 ntBASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 AC005921.1-201ENST00000510589 286 ntBASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 AC011406.1-201ENST00000512440 370 ntBASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 RNA5SP341-201ENST00000516261 117 ntBASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 EIF4A1P12-201ENST00000551910 141 ntBASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 AC233702.9-201ENST00000581528 203 ntBASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 AC007229.1-201ENST00000590455 412 ntBASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 AL034555.1-201ENST00000604816 211 ntBASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 MIR7106-201ENST00000612419 65 ntBASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 MIR7702-201ENST00000621931 59 ntBASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.61□□□□□ -1.83
RSPO4Q2I0M5 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 Y_RNA.213-201ENST00000364178 111 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 RNU6-776P-201ENST00000364403 104 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 RNU6-1022P-201ENST00000365049 104 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 Y_RNA.313-201ENST00000365095 103 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 RPL21P3-201ENST00000395517 478 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 AL117342.1-201ENST00000404861 406 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 AL355796.1-201ENST00000406706 323 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 SNORA3C-201ENST00000408792 125 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 CYCSP48-201ENST00000417124 323 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 AL121890.1-201ENST00000435457 205 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 AC023449.1-201ENST00000454464 154 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 SNORD108-201ENST00000459332 71 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 RPL27AP5-201ENST00000469428 449 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 RNU6-581P-201ENST00000516214 105 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 SNORA31.8-201ENST00000516327 108 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 RNU2-44P-201ENST00000516795 194 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 MIR5680-201ENST00000577577 84 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 MIR4666B-201ENST00000578142 81 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 AC107294.3-201ENST00000609211 526 ntBASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO4Q2I0M5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 RNU4-35P-201ENST00000362588 141 ntBASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 Y_RNA.66-201ENST00000362862 102 ntBASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 RNU6-217P-201ENST00000384164 104 ntBASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 MIR199A2-201ENST00000385289 110 ntBASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 RNU6-830P-201ENST00000516353 107 ntBASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 RNU6-126P-201ENST00000516685 103 ntBASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 AP004371.1-201ENST00000525240 214 ntBASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 AC022254.1-201ENST00000567857 235 ntBASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 MIR3129-201ENST00000581095 76 ntBASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 MAPK10-253ENST00000641010 4072 ntBASIC3.59□□□□□ -1.83
RSPO4Q2I0M5 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
RSPO4Q2I0M5 SCN1A-220ENST00000641603 12506 ntBASIC3.59□□□□□ -1.84
RSPO4Q2I0M5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.84
RSPO4Q2I0M5 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 RNU1-108P-201ENST00000362556 161 ntBASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 Y_RNA.265-201ENST00000364677 108 ntBASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 RNU6-1240P-201ENST00000365155 104 ntBASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 SNORA4.2-201ENST00000365313 147 ntBASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 RNU6-979P-201ENST00000383896 107 ntBASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 NDUFB4P6-201ENST00000436819 366 ntBASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 AC083863.1-201ENST00000438811 231 ntBASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 RPS26P55-201ENST00000471178 356 ntBASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 SCARNA23-201ENST00000516060 130 ntBASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 RNU6-1018P-201ENST00000516577 106 ntBASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 RPL23AP91-201ENST00000569211 455 ntBASIC3.58□□□□□ -1.84
RSPO4Q2I0M5 Pinc.1-201ENST00000616452 154 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms