Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 RNU6-926P-201ENST00000384075 107 ntBASIC3.2□□□□□ -1.9
VPS72Q15906 RNU6-318P-201ENST00000384283 103 ntBASIC3.2□□□□□ -1.9
VPS72Q15906 SNORA64-201ENST00000384674 134 ntBASIC3.2□□□□□ -1.9
VPS72Q15906 RNA5SP390-201ENST00000410191 113 ntBASIC3.2□□□□□ -1.9
VPS72Q15906 RPL23AP36-201ENST00000413895 458 ntBASIC3.2□□□□□ -1.9
VPS72Q15906 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS72Q15906 EIF1P2-201ENST00000428233 350 ntBASIC3.2□□□□□ -1.9
VPS72Q15906 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS72Q15906 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS72Q15906 HSPE1P4-201ENST00000550617 308 ntBASIC3.2□□□□□ -1.9
VPS72Q15906 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS72Q15906 MIR6873-201ENST00000622788 63 ntBASIC3.2□□□□□ -1.9
VPS72Q15906 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS72Q15906 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS72Q15906 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS72Q15906 Y_RNA.20-201ENST00000362479 113 ntBASIC3.19□□□□□ -1.9
VPS72Q15906 RNU6-937P-201ENST00000384325 106 ntBASIC3.19□□□□□ -1.9
VPS72Q15906 RNU1-57P-201ENST00000384491 166 ntBASIC3.19□□□□□ -1.9
VPS72Q15906 RNU1-139P-201ENST00000391307 165 ntBASIC3.19□□□□□ -1.9
VPS72Q15906 MRPL35P1-201ENST00000404272 572 ntBASIC3.19□□□□□ -1.9
VPS72Q15906 Y_RNA.595-201ENST00000410403 105 ntBASIC3.19□□□□□ -1.9
VPS72Q15906 RNU6-1140P-201ENST00000410517 106 ntBASIC3.19□□□□□ -1.9
VPS72Q15906 RNU2-64P-201ENST00000411315 191 ntBASIC3.19□□□□□ -1.9
VPS72Q15906 GPM6BP3-201ENST00000442797 145 ntBASIC3.19□□□□□ -1.9
VPS72Q15906 AC016256.1-201ENST00000547971 354 ntBASIC3.19□□□□□ -1.9
VPS72Q15906 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS72Q15906 AL670379.2-201ENST00000604983 252 ntBASIC3.19□□□□□ -1.9
VPS72Q15906 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS72Q15906 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
VPS72Q15906 Y_RNA.16-201ENST00000362421 102 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 RNU6-1010P-201ENST00000362757 107 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 SNORD81.1-201ENST00000363064 77 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 RNU6-1141P-201ENST00000364520 107 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 RNU6-541P-201ENST00000384709 110 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 RNA5SP213-201ENST00000391031 106 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 Y_RNA.602-201ENST00000410535 92 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS72Q15906 RPL30P12-201ENST00000474666 353 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 AC103975.1-201ENST00000482506 483 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 AP001025.1-201ENST00000486139 332 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 AIG1P1-201ENST00000503376 148 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 AC026436.1-201ENST00000510537 270 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 RNU6-1114P-201ENST00000516022 107 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 RNU6-1338P-201ENST00000516328 91 ntBASIC3.18□□□□□ -1.9
VPS72Q15906 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS72Q15906 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS72Q15906 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS72Q15906 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS72Q15906 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS72Q15906 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS72Q15906 RNA5SP361-201ENST00000362686 118 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 SNORD113-8-201ENST00000363497 74 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 U8.9-201ENST00000365667 134 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 RNU6-338P-201ENST00000383888 105 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 SNORA36A-201ENST00000384221 132 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 U8.10-201ENST00000384260 133 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 Y_RNA.539-201ENST00000384635 107 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 Y_RNA.541-201ENST00000384640 113 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 MIR487A-201ENST00000385009 80 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 Y_RNA.581-201ENST00000391017 97 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 SNORA26.7-201ENST00000391288 122 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 MIR548I3-201ENST00000408378 149 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 MIR548I1-201ENST00000408810 149 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 AL590135.1-201ENST00000422215 156 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 CYP2C59P-201ENST00000457790 269 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 AP004217.1-201ENST00000480579 346 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 AC016632.1-201ENST00000503994 196 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 RNU6-1053P-201ENST00000515930 101 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 AC027288.2-201ENST00000553028 243 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 AC090897.2-201ENST00000581715 130 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 AL450472.1-202ENST00000637286 180 ntBASIC3.17□□□□□ -1.9
VPS72Q15906 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VPS72Q15906 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS72Q15906 Y_RNA.54-201ENST00000362766 105 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 Y_RNA.319-201ENST00000365138 92 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 RNA5SP240-201ENST00000365355 128 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 Y_RNA.352-201ENST00000365439 102 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 U8.13-201ENST00000390842 128 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 SNORA26.9-201ENST00000391322 122 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 AL603910.2-201ENST00000407268 136 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 RN7SKP61-201ENST00000410642 295 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 CYCSP48-201ENST00000417124 323 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 EIF4EP4-201ENST00000424916 578 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 WARS2P1-201ENST00000429678 537 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 AL139109.1-201ENST00000455491 297 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 RNU6-138P-201ENST00000515952 107 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 CKS1BP7-201ENST00000522230 235 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS72Q15906 AC026470.2-201ENST00000561492 181 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 UBL5P4-201ENST00000562584 236 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 AC005296.1-201ENST00000616145 209 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 AC137590.2-201ENST00000619709 240 ntBASIC3.16□□□□□ -1.9
VPS72Q15906 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS72Q15906 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS72Q15906 AC069528.2-201ENST00000624849 1991 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
VPS72Q15906 RNU6-200P-201ENST00000364743 107 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 RNU6-209P-201ENST00000384118 107 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 RNU6-622P-201ENST00000384272 103 ntBASIC3.15□□□□□ -1.91
VPS72Q15906 RNU6-102P-201ENST00000384485 104 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms