Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.5□□□□□ -1.85
PCDH1Q08174 U8.18-201ENST00000459285 133 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 RN7SL542P-201ENST00000467147 294 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 AC083906.5-201ENST00000503722 328 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 RNU4-57P-201ENST00000515980 135 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 Y_RNA.686-201ENST00000516548 134 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDH1Q08174 AC109329.2-201ENST00000519658 482 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 AC005972.2-201ENST00000604690 348 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 AP001340.1-201ENST00000624405 217 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 GABRG2-229ENST00000641017 3628 ntBASIC3.5□□□□□ -1.85
PCDH1Q08174 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDH1Q08174 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDH1Q08174 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDH1Q08174 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDH1Q08174 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDH1Q08174 AL356292.1-201ENST00000283110 373 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 RNU6-944P-201ENST00000364023 107 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 SNORA75.5-201ENST00000391291 81 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 MIR1278-201ENST00000408753 81 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 RNU6-588P-201ENST00000410281 105 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 CYCSP19-201ENST00000411715 316 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 AL135786.1-201ENST00000415892 214 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 RNU6-437P-201ENST00000459408 95 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 RPL23AP54-201ENST00000495129 419 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 ATP5EP1-201ENST00000510257 156 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 AP001328.1-201ENST00000528550 176 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 MIR4425-201ENST00000580572 84 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 MIR3158-1-201ENST00000583596 81 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 XIST_intron.1-201ENST00000619444 68 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 MIR6075-201ENST00000620782 95 ntBASIC3.49□□□□□ -1.85
PCDH1Q08174 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDH1Q08174 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDH1Q08174 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDH1Q08174 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDH1Q08174 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDH1Q08174 SNORD45.3-201ENST00000363836 72 ntBASIC3.48□□□□□ -1.85
PCDH1Q08174 SNORD31B-201ENST00000364977 69 ntBASIC3.48□□□□□ -1.85
PCDH1Q08174 MIR184-201ENST00000384962 84 ntBASIC3.48□□□□□ -1.85
PCDH1Q08174 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDH1Q08174 Y_RNA.622-201ENST00000411091 108 ntBASIC3.48□□□□□ -1.85
PCDH1Q08174 ATP5A1P2-201ENST00000412323 255 ntBASIC3.48□□□□□ -1.85
PCDH1Q08174 AL035461.1-201ENST00000421490 332 ntBASIC3.48□□□□□ -1.85
PCDH1Q08174 AC016717.1-201ENST00000448918 286 ntBASIC3.48□□□□□ -1.85
PCDH1Q08174 RN7SL594P-201ENST00000470590 287 ntBASIC3.48□□□□□ -1.85
PCDH1Q08174 RNA5SP20-201ENST00000515976 84 ntBASIC3.48□□□□□ -1.85
PCDH1Q08174 RNU6-919P-201ENST00000516731 104 ntBASIC3.48□□□□□ -1.85
PCDH1Q08174 AC027419.1-201ENST00000522976 328 ntBASIC3.48□□□□□ -1.85
PCDH1Q08174 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.48□□□□□ -1.85
PCDH1Q08174 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDH1Q08174 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDH1Q08174 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDH1Q08174 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDH1Q08174 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDH1Q08174 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDH1Q08174 AC068647.1-201ENST00000489539 2265 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDH1Q08174 SNORA14A-201ENST00000364773 135 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 RNU6-44P-201ENST00000384045 107 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 SCARNA17.1-201ENST00000516211 143 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 SCARNA17.2-201ENST00000516334 143 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 SNORA67.7-201ENST00000516664 135 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 RNU2-56P-201ENST00000516826 190 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 AC093331.1-201ENST00000521474 169 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 AL031274.2-201ENST00000599419 203 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 U7.2-201ENST00000607576 63 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 AC093732.2-201ENST00000607950 274 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 SCARNA17.4-201ENST00000614296 143 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDH1Q08174 CENPCP1-201ENST00000533085 2578 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 AC091152.2-201ENST00000591628 2569 ntBASIC3.47□□□□□ -1.85
PCDH1Q08174 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PCDH1Q08174 RNU6-674P-201ENST00000363831 107 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 Y_RNA.251-201ENST00000364551 99 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 RNA5SP496-201ENST00000391240 109 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 SNORA79-201ENST00000408376 140 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 RN7SKP111-201ENST00000410349 271 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 RN7SKP101-201ENST00000411376 320 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDH1Q08174 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDH1Q08174 SNRPGP8-201ENST00000454064 226 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 SNORD105B-201ENST00000458770 79 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 U3.44-201ENST00000458938 192 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 AC008155.2-201ENST00000464337 397 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDH1Q08174 RNU2-27P-201ENST00000516185 142 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 RNU6-711P-201ENST00000517255 106 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 AC026333.2-201ENST00000542164 106 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDH1Q08174 MIR4474-201ENST00000579189 78 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 MIR3944-201ENST00000581277 108 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDH1Q08174 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 AP003355.3-201ENST00000623465 114 ntBASIC3.46□□□□□ -1.86
PCDH1Q08174 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDH1Q08174 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDH1Q08174 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDH1Q08174 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDH1Q08174 AC007256.1-201ENST00000392253 2765 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms