Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RNU6-200P-201ENST00000364743 107 ntBASIC2.38□□□□□ -2.03
LTBQ06643 RNU6-290P-201ENST00000365212 101 ntBASIC2.38□□□□□ -2.03
LTBQ06643 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LTBQ06643 RNU6-378P-201ENST00000384324 107 ntBASIC2.38□□□□□ -2.03
LTBQ06643 MIR147B-201ENST00000390185 80 ntBASIC2.38□□□□□ -2.03
LTBQ06643 RNA5SP210-201ENST00000391034 120 ntBASIC2.38□□□□□ -2.03
LTBQ06643 MIR548I3-201ENST00000408378 149 ntBASIC2.38□□□□□ -2.03
LTBQ06643 MIR548I1-201ENST00000408810 149 ntBASIC2.38□□□□□ -2.03
LTBQ06643 AIMP1P2-201ENST00000425294 312 ntBASIC2.38□□□□□ -2.03
LTBQ06643 AC009414.1-201ENST00000427200 443 ntBASIC2.38□□□□□ -2.03
LTBQ06643 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.38□□□□□ -2.03
LTBQ06643 AP001324.2-201ENST00000461163 319 ntBASIC2.38□□□□□ -2.03
LTBQ06643 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.38□□□□□ -2.03
LTBQ06643 GZMAP1-201ENST00000503054 631 ntBASIC2.38□□□□□ -2.03
LTBQ06643 SERF1AP1-201ENST00000514575 187 ntBASIC2.38□□□□□ -2.03
LTBQ06643 SNORA25.14-201ENST00000516481 132 ntBASIC2.38□□□□□ -2.03
LTBQ06643 RNA5SP54-201ENST00000516951 92 ntBASIC2.38□□□□□ -2.03
LTBQ06643 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.38□□□□□ -2.03
LTBQ06643 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.38□□□□□ -2.03
LTBQ06643 RRN3P3-201ENST00000549207 578 ntBASIC2.38□□□□□ -2.03
LTBQ06643 CYP4A27P-201ENST00000567218 190 ntBASIC2.38□□□□□ -2.03
LTBQ06643 AC055872.1-201ENST00000570978 278 ntBASIC2.38□□□□□ -2.03
LTBQ06643 AL356575.1-201ENST00000603008 283 ntBASIC2.38□□□□□ -2.03
LTBQ06643 AC009779.6-201ENST00000603972 165 ntBASIC2.38□□□□□ -2.03
LTBQ06643 AC010999.1-201ENST00000611856 324 ntBASIC2.38□□□□□ -2.03
LTBQ06643 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.38□□□□□ -2.03
LTBQ06643 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
LTBQ06643 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
LTBQ06643 AC135776.4-201ENST00000624300 1904 ntBASIC2.38□□□□□ -2.03
LTBQ06643 RNU6-1010P-201ENST00000362757 107 ntBASIC2.37□□□□□ -2.03
LTBQ06643 RNU4-90P-201ENST00000362773 141 ntBASIC2.37□□□□□ -2.03
LTBQ06643 Y_RNA.164-201ENST00000363709 102 ntBASIC2.37□□□□□ -2.03
LTBQ06643 RNU6-280P-201ENST00000364145 104 ntBASIC2.37□□□□□ -2.03
LTBQ06643 Y_RNA.269-201ENST00000364685 89 ntBASIC2.37□□□□□ -2.03
LTBQ06643 MIR208B-201ENST00000401172 77 ntBASIC2.37□□□□□ -2.03
LTBQ06643 CBX3P9-201ENST00000402326 552 ntBASIC2.37□□□□□ -2.03
LTBQ06643 RNA5SP492-201ENST00000411330 114 ntBASIC2.37□□□□□ -2.03
LTBQ06643 AC096649.2-201ENST00000416186 393 ntBASIC2.37□□□□□ -2.03
LTBQ06643 MTND5P15-201ENST00000434246 349 ntBASIC2.37□□□□□ -2.03
LTBQ06643 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.37□□□□□ -2.03
LTBQ06643 UBBP3-201ENST00000445497 241 ntBASIC2.37□□□□□ -2.03
LTBQ06643 RPL23AP70-201ENST00000483361 460 ntBASIC2.37□□□□□ -2.03
LTBQ06643 SEPT14P8-201ENST00000508026 178 ntBASIC2.37□□□□□ -2.03
LTBQ06643 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.37□□□□□ -2.03
LTBQ06643 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.37□□□□□ -2.03
LTBQ06643 RNA5SP148-201ENST00000516527 94 ntBASIC2.37□□□□□ -2.03
LTBQ06643 AK6P2-201ENST00000549020 471 ntBASIC2.37□□□□□ -2.03
LTBQ06643 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.37□□□□□ -2.03
LTBQ06643 AC130289.1-201ENST00000577321 73 ntBASIC2.37□□□□□ -2.03
LTBQ06643 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.37□□□□□ -2.03
LTBQ06643 MIR3923-201ENST00000579521 83 ntBASIC2.37□□□□□ -2.03
LTBQ06643 MIR3136-201ENST00000583498 78 ntBASIC2.37□□□□□ -2.03
LTBQ06643 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.37□□□□□ -2.03
LTBQ06643 SNORD113-5-201ENST00000607261 78 ntBASIC2.37□□□□□ -2.03
LTBQ06643 AC005520.5-201ENST00000613926 164 ntBASIC2.37□□□□□ -2.03
LTBQ06643 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.37□□□□□ -2.03
LTBQ06643 AC127459.3-201ENST00000624328 466 ntBASIC2.37□□□□□ -2.03
LTBQ06643 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.37□□□□□ -2.03
LTBQ06643 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.37□□□□□ -2.03
LTBQ06643 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LTBQ06643 BX322639.1-202ENST00000423987 2213 ntBASIC2.37□□□□□ -2.03
LTBQ06643 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LTBQ06643 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
LTBQ06643 RNU4-15P-201ENST00000362613 141 ntBASIC2.36□□□□□ -2.03
LTBQ06643 SNORD114-19-201ENST00000363072 75 ntBASIC2.36□□□□□ -2.03
LTBQ06643 RNY1-201ENST00000364228 113 ntBASIC2.36□□□□□ -2.03
LTBQ06643 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LTBQ06643 DEFA7P-201ENST00000382676 285 ntBASIC2.36□□□□□ -2.03
LTBQ06643 SNORA67.4-201ENST00000384688 142 ntBASIC2.36□□□□□ -2.03
LTBQ06643 Y_RNA.570-201ENST00000384750 101 ntBASIC2.36□□□□□ -2.03
LTBQ06643 MIR9-1-201ENST00000385198 89 ntBASIC2.36□□□□□ -2.03
LTBQ06643 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.36□□□□□ -2.03
LTBQ06643 MIR1289-2-201ENST00000408360 111 ntBASIC2.36□□□□□ -2.03
LTBQ06643 RNU5A-5P-201ENST00000411054 116 ntBASIC2.36□□□□□ -2.03
LTBQ06643 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.36□□□□□ -2.03
LTBQ06643 snoU13.14-201ENST00000459372 104 ntBASIC2.36□□□□□ -2.03
LTBQ06643 AC112771.1-201ENST00000463581 102 ntBASIC2.36□□□□□ -2.03
LTBQ06643 AC091179.3-201ENST00000474761 144 ntBASIC2.36□□□□□ -2.03
LTBQ06643 RPL31P41-201ENST00000477967 372 ntBASIC2.36□□□□□ -2.03
LTBQ06643 RNA5SP458-201ENST00000516188 119 ntBASIC2.36□□□□□ -2.03
LTBQ06643 RNA5SP282-201ENST00000516355 108 ntBASIC2.36□□□□□ -2.03
LTBQ06643 RNU6-966P-201ENST00000516479 104 ntBASIC2.36□□□□□ -2.03
LTBQ06643 RNU7-110P-201ENST00000516891 62 ntBASIC2.36□□□□□ -2.03
LTBQ06643 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.36□□□□□ -2.03
LTBQ06643 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.36□□□□□ -2.03
LTBQ06643 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.36□□□□□ -2.03
LTBQ06643 AL034555.1-201ENST00000604816 211 ntBASIC2.36□□□□□ -2.03
LTBQ06643 BX284668.6-201ENST00000606899 438 ntBASIC2.36□□□□□ -2.03
LTBQ06643 UCA1.1-201ENST00000620952 75 ntBASIC2.36□□□□□ -2.03
LTBQ06643 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.36□□□□□ -2.03
LTBQ06643 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.36□□□□□ -2.03
LTBQ06643 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LTBQ06643 MTND5P35-201ENST00000557537 1720 ntBASIC2.36□□□□□ -2.03
LTBQ06643 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LTBQ06643 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.35□□□□□ -2.03
LTBQ06643 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LTBQ06643 Y_RNA.76-201ENST00000362931 109 ntBASIC2.35□□□□□ -2.03
LTBQ06643 Y_RNA.179-201ENST00000363844 90 ntBASIC2.35□□□□□ -2.03
LTBQ06643 SNORA25.6-201ENST00000364121 118 ntBASIC2.35□□□□□ -2.03
LTBQ06643 Y_RNA.274-201ENST00000364714 101 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 248.4 ms