Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SNORA44-201ENST00000384584 132 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP4BP1P59074 TRIAP1P1-201ENST00000427062 225 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 NDUFB4P10-201ENST00000452541 359 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 Y_RNA.637-201ENST00000459424 114 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 AC006483.1-201ENST00000487308 313 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 RNU6-436P-201ENST00000516171 114 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 RNU6-789P-201ENST00000517105 102 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 CYCSP23-201ENST00000519781 313 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.56□□□□□ -1.84
CHMP4BP1P59074 MRPS18CP4-201ENST00000535821 231 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 SNORA50A-202ENST00000629536 136 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 AC093831.2-201ENST00000624393 3427 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP4BP1P59074 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP4BP1P59074 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP4BP1P59074 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.55□□□□□ -1.84
CHMP4BP1P59074 RNU6-1272P-201ENST00000362776 107 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 RNU4-56P-201ENST00000364700 142 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 Y_RNA.304-201ENST00000365011 112 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 RNU5E-9P-201ENST00000411164 104 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 RPL32P35-201ENST00000415214 394 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 AC024067.1-201ENST00000426199 223 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.55□□□□□ -1.84
CHMP4BP1P59074 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.55□□□□□ -1.84
CHMP4BP1P59074 RN7SL75P-201ENST00000461926 281 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.55□□□□□ -1.84
CHMP4BP1P59074 SCARNA3-201ENST00000517097 143 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.55□□□□□ -1.84
CHMP4BP1P59074 EIF4A1P12-201ENST00000551910 141 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 MIR2682-201ENST00000580305 110 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 AC104465.1-201ENST00000611365 139 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 MIR7157-201ENST00000635801 60 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 U6.106-201ENST00000636360 105 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHMP4BP1P59074 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHMP4BP1P59074 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.55□□□□□ -1.84
CHMP4BP1P59074 AC008264.2-201ENST00000610193 3731 ntBASIC3.55□□□□□ -1.84
CHMP4BP1P59074 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP4BP1P59074 U6atac.2-201ENST00000408644 118 ntBASIC3.54□□□□□ -1.84
CHMP4BP1P59074 RNU6-1135P-201ENST00000411083 103 ntBASIC3.54□□□□□ -1.84
CHMP4BP1P59074 RPL30P4-201ENST00000429309 333 ntBASIC3.54□□□□□ -1.84
CHMP4BP1P59074 CST9LP2-201ENST00000437612 320 ntBASIC3.54□□□□□ -1.84
CHMP4BP1P59074 RPS3P1-201ENST00000456781 192 ntBASIC3.54□□□□□ -1.84
CHMP4BP1P59074 RNU6-1278P-201ENST00000516130 107 ntBASIC3.54□□□□□ -1.84
CHMP4BP1P59074 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP4BP1P59074 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.54□□□□□ -1.84
CHMP4BP1P59074 AC027176.1-201ENST00000560204 514 ntBASIC3.54□□□□□ -1.84
CHMP4BP1P59074 RPL30P11-203ENST00000598995 310 ntBASIC3.54□□□□□ -1.84
CHMP4BP1P59074 SNRPGP20-201ENST00000604477 205 ntBASIC3.54□□□□□ -1.84
CHMP4BP1P59074 AC005562.2-201ENST00000618264 111 ntBASIC3.54□□□□□ -1.84
CHMP4BP1P59074 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP4BP1P59074 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP4BP1P59074 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.54□□□□□ -1.84
CHMP4BP1P59074 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP4BP1P59074 AC080128.1-201ENST00000474389 1917 ntBASIC3.53□□□□□ -1.84
CHMP4BP1P59074 SNORD67-201ENST00000390833 111 ntBASIC3.53□□□□□ -1.84
CHMP4BP1P59074 U3.40-201ENST00000408706 208 ntBASIC3.53□□□□□ -1.84
CHMP4BP1P59074 RNU6-394P-201ENST00000410735 107 ntBASIC3.53□□□□□ -1.84
CHMP4BP1P59074 U8.19-201ENST00000459095 133 ntBASIC3.53□□□□□ -1.84
CHMP4BP1P59074 RPS29P26-201ENST00000477483 171 ntBASIC3.53□□□□□ -1.84
CHMP4BP1P59074 RNU1-117P-201ENST00000517041 158 ntBASIC3.53□□□□□ -1.84
CHMP4BP1P59074 SUMO2P18-201ENST00000518873 252 ntBASIC3.53□□□□□ -1.84
CHMP4BP1P59074 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP4BP1P59074 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.53□□□□□ -1.84
CHMP4BP1P59074 MIR4298-201ENST00000584380 73 ntBASIC3.53□□□□□ -1.84
CHMP4BP1P59074 uc_338.25-201ENST00000613756 156 ntBASIC3.53□□□□□ -1.84
CHMP4BP1P59074 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP4BP1P59074 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP4BP1P59074 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CHMP4BP1P59074 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP4BP1P59074 SNORA71.1-201ENST00000364523 117 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 RNU6-1264P-201ENST00000383891 107 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 Y_RNA.510-201ENST00000384511 114 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 MIR218-1-201ENST00000384999 110 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 BTF3P11-201ENST00000426582 477 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 AC244505.4-201ENST00000434905 287 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 RPS12P18-201ENST00000442381 270 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 SSXP5-201ENST00000443473 287 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP4BP1P59074 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP4BP1P59074 Y_RNA.662-201ENST00000516028 97 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 MIR3144-201ENST00000579460 79 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.52□□□□□ -1.85
CHMP4BP1P59074 AL033523.1-201ENST00000605153 153 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 TCL6_2.1-201ENST00000615162 119 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.52□□□□□ -1.85
CHMP4BP1P59074 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.52□□□□□ -1.85
CHMP4BP1P59074 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP4BP1P59074 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CHMP4BP1P59074 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHMP4BP1P59074 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CHMP4BP1P59074 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHMP4BP1P59074 RNU5F-3P-201ENST00000363767 117 ntBASIC3.51□□□□□ -1.85
CHMP4BP1P59074 U3.9-201ENST00000363823 204 ntBASIC3.51□□□□□ -1.85
CHMP4BP1P59074 RNU6-801P-201ENST00000364087 105 ntBASIC3.51□□□□□ -1.85
CHMP4BP1P59074 SNORD115-30-201ENST00000364117 82 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms