Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 EEF1B2P7-201ENST00000451177 676 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 AL137159.1-201ENST00000452808 512 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 CENPBD1P1-201ENST00000464061 469 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 RPL23AP67-201ENST00000465341 474 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 AC006483.1-201ENST00000487308 313 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.03□□□□□ -1.92
GFRA1P56159 AC010598.1-201ENST00000510378 103 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.03□□□□□ -1.92
GFRA1P56159 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 U6.106-201ENST00000636360 105 ntBASIC3.03□□□□□ -1.92
GFRA1P56159 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GFRA1P56159 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.03□□□□□ -1.93
GFRA1P56159 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
GFRA1P56159 AC092435.3-201ENST00000565538 3654 ntBASIC3.03□□□□□ -1.93
GFRA1P56159 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
GFRA1P56159 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
GFRA1P56159 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
GFRA1P56159 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.02□□□□□ -1.93
GFRA1P56159 Y_RNA.310-201ENST00000365063 113 ntBASIC3.02□□□□□ -1.93
GFRA1P56159 MIR184-201ENST00000384962 84 ntBASIC3.02□□□□□ -1.93
GFRA1P56159 MIR561-201ENST00000385216 97 ntBASIC3.02□□□□□ -1.93
GFRA1P56159 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.02□□□□□ -1.93
GFRA1P56159 SNORD65B-201ENST00000459126 73 ntBASIC3.02□□□□□ -1.93
GFRA1P56159 RN7SL807P-201ENST00000470923 297 ntBASIC3.02□□□□□ -1.93
GFRA1P56159 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.02□□□□□ -1.93
GFRA1P56159 RNVU1-4-201ENST00000612985 164 ntBASIC3.02□□□□□ -1.93
GFRA1P56159 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
GFRA1P56159 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
GFRA1P56159 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
GFRA1P56159 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.02□□□□□ -1.93
GFRA1P56159 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
GFRA1P56159 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.02□□□□□ -1.93
GFRA1P56159 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GFRA1P56159 AC073346.2-201ENST00000624724 2058 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 SNORA27.1-201ENST00000362604 124 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 Y_RNA.124-201ENST00000363339 93 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 Y_RNA.240-201ENST00000364469 95 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 Y_RNA.293-201ENST00000364908 93 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 Y_RNA.333-201ENST00000365274 102 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 RNU6-407P-201ENST00000365280 104 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 SNORA48.5-201ENST00000391143 135 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 SNORA48.8-201ENST00000391324 134 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 RNU4-61P-201ENST00000411243 107 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.01□□□□□ -1.93
GFRA1P56159 HSPE1P13-201ENST00000451143 297 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 AC107934.2-201ENST00000518653 310 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 AC100767.1-201ENST00000528178 123 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.01□□□□□ -1.93
GFRA1P56159 MIR3117-201ENST00000584034 78 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 AC017071.1-201ENST00000564407 2204 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 AC138915.1-201ENST00000565427 1685 ntBASIC3.01□□□□□ -1.93
GFRA1P56159 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.01□□□□□ -1.93
GFRA1P56159 AC134026.1-201ENST00000623249 2239 ntBASIC3□□□□□ -1.93
GFRA1P56159 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3□□□□□ -1.93
GFRA1P56159 Y_RNA.7-201ENST00000362352 102 ntBASIC3□□□□□ -1.93
GFRA1P56159 RNU6-1048P-201ENST00000364054 107 ntBASIC3□□□□□ -1.93
GFRA1P56159 AL355497.1-201ENST00000406262 551 ntBASIC3□□□□□ -1.93
GFRA1P56159 AC010154.1-201ENST00000425857 269 ntBASIC3□□□□□ -1.93
GFRA1P56159 AC104332.2-201ENST00000429959 156 ntBASIC3□□□□□ -1.93
GFRA1P56159 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3□□□□□ -1.93
GFRA1P56159 RPS20P10-201ENST00000451209 253 ntBASIC3□□□□□ -1.93
GFRA1P56159 RPS26P55-201ENST00000471178 356 ntBASIC3□□□□□ -1.93
GFRA1P56159 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3□□□□□ -1.93
GFRA1P56159 AC074198.2-201ENST00000508153 258 ntBASIC3□□□□□ -1.93
GFRA1P56159 AC025647.1-201ENST00000517879 253 ntBASIC3□□□□□ -1.93
GFRA1P56159 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
GFRA1P56159 MIR7112-201ENST00000616126 65 ntBASIC3□□□□□ -1.93
GFRA1P56159 AC006435.5-201ENST00000624486 112 ntBASIC3□□□□□ -1.93
GFRA1P56159 AL355596.1-201ENST00000565399 3996 ntBASIC3□□□□□ -1.93
GFRA1P56159 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3□□□□□ -1.93
GFRA1P56159 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
GFRA1P56159 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3□□□□□ -1.93
GFRA1P56159 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
GFRA1P56159 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
GFRA1P56159 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
GFRA1P56159 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.99□□□□□ -1.93
GFRA1P56159 RNU6-1240P-201ENST00000365155 104 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 Y_RNA.571-201ENST00000384753 98 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 SNORA11.1-201ENST00000408133 129 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 AC003685.2-201ENST00000422795 395 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 HSPE1P21-201ENST00000438283 308 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 AC093259.1-201ENST00000509755 300 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 RNU6-991P-201ENST00000516168 107 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 RNU6-1337P-201ENST00000516525 95 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 RNU6-1212P-201ENST00000517023 104 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 AC027419.1-201ENST00000522976 328 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 PRELID2P1-201ENST00000552837 301 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.99□□□□□ -1.93
GFRA1P56159 MIR5195-201ENST00000583555 115 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 YPEL5P2-201ENST00000605553 359 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 RMST_8.1-201ENST00000610287 165 ntBASIC2.99□□□□□ -1.93
GFRA1P56159 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.99□□□□□ -1.93
GFRA1P56159 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
GFRA1P56159 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
GFRA1P56159 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
GFRA1P56159 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.98□□□□□ -1.93
GFRA1P56159 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
GFRA1P56159 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
GFRA1P56159 RNU6-1205P-201ENST00000363625 106 ntBASIC2.98□□□□□ -1.93
GFRA1P56159 SNORA9-201ENST00000384215 133 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms