Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 Y_RNA.333-201ENST00000365274 102 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 Y_RNA.380-201ENST00000365663 111 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 RNU6-245P-201ENST00000384020 107 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 RNU6-937P-201ENST00000384325 106 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 MIR95-201ENST00000385072 81 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 Y_RNA.595-201ENST00000410403 105 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 RNU2-40P-201ENST00000410833 196 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 RPL21P38-201ENST00000418090 167 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 SDAD1P3-201ENST00000427380 333 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 AC009237.7-201ENST00000447357 229 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 UQCRBP2-201ENST00000447827 297 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 RNU6-991P-201ENST00000516168 107 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 RNU6-966P-201ENST00000516479 104 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 RNU6-107P-201ENST00000516643 102 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 AP002001.1-203ENST00000534002 267 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 AC026470.2-201ENST00000561492 181 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 AL121655.1-201ENST00000605811 308 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.06□□□□□ -2.08
HOXA1P49639 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXA1P49639 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXA1P49639 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
HOXA1P49639 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXA1P49639 MIR208A-201ENST00000362287 71 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 Y_RNA.47-201ENST00000362697 108 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 RNU6-1305P-201ENST00000364353 104 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 Y_RNA.526-201ENST00000384572 110 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HOXA1P49639 ELOCP21-201ENST00000412558 336 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.05□□□□□ -2.08
HOXA1P49639 COTL1P1-201ENST00000422309 375 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 EEF1B2P7-201ENST00000451177 676 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 AC007395.1-201ENST00000451333 677 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 CYP2C59P-201ENST00000457790 269 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 RPS23P5-201ENST00000495419 428 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 SNORA48.11-201ENST00000517015 89 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 RNU6-667P-201ENST00000517186 102 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXA1P49639 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXA1P49639 AC022616.8-201ENST00000533569 253 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 AC018448.1-201ENST00000552843 316 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 AC022202.1-201ENST00000613515 211 ntBASIC2.05□□□□□ -2.08
HOXA1P49639 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXA1P49639 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HOXA1P49639 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXA1P49639 Y_RNA.19-201ENST00000362462 99 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 RNU1-62P-201ENST00000362599 164 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 RNU6-20P-201ENST00000384106 107 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 Y_RNA.439-201ENST00000384119 94 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 SNORA9-201ENST00000384215 133 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 SNORA67.2-201ENST00000384300 149 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 SNORA44-201ENST00000384584 132 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 Y_RNA.574-201ENST00000384766 95 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 MIR215-201ENST00000384858 110 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 RNU6-1109P-201ENST00000391187 107 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 MIR320B2-201ENST00000408479 138 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 RNU4-30P-201ENST00000410245 143 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 CBX3P6-201ENST00000430257 527 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 FCF1P4-201ENST00000448326 183 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 AC016717.1-201ENST00000448918 286 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 HMGN2P18-201ENST00000450680 270 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 PCNPP5-201ENST00000452246 481 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 RPL23AP3-201ENST00000453844 468 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.04□□□□□ -2.08
HOXA1P49639 LINC01399-202ENST00000458450 244 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.04□□□□□ -2.08
HOXA1P49639 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.04□□□□□ -2.08
HOXA1P49639 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.04□□□□□ -2.08
HOXA1P49639 AC008413.1-201ENST00000511864 177 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 SNORA4.4-201ENST00000515921 135 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 SNORA40.15-201ENST00000516884 107 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.04□□□□□ -2.08
HOXA1P49639 CENPCP1-201ENST00000533085 2578 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 AC018630.3-201ENST00000542637 96 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.04□□□□□ -2.08
HOXA1P49639 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXA1P49639 SNORD11B-201ENST00000607707 90 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.04□□□□□ -2.08
HOXA1P49639 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.04□□□□□ -2.08
HOXA1P49639 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.04□□□□□ -2.08
HOXA1P49639 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
HOXA1P49639 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HOXA1P49639 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.03□□□□□ -2.08
HOXA1P49639 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
HOXA1P49639 RNU6-626P-201ENST00000363354 107 ntBASIC2.03□□□□□ -2.08
HOXA1P49639 RNU6-770P-201ENST00000363929 105 ntBASIC2.03□□□□□ -2.08
HOXA1P49639 SNORA25B-201ENST00000365507 128 ntBASIC2.03□□□□□ -2.08
HOXA1P49639 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXA1P49639 RAB28P5-201ENST00000427490 651 ntBASIC2.03□□□□□ -2.08
HOXA1P49639 AC107083.1-201ENST00000439643 279 ntBASIC2.03□□□□□ -2.08
HOXA1P49639 AL135938.1-201ENST00000443141 297 ntBASIC2.03□□□□□ -2.08
HOXA1P49639 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXA1P49639 RNU6-625P-201ENST00000459412 107 ntBASIC2.03□□□□□ -2.08
HOXA1P49639 RNU6-344P-201ENST00000516635 111 ntBASIC2.03□□□□□ -2.08
HOXA1P49639 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.03□□□□□ -2.08
HOXA1P49639 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXA1P49639 AL109918.3-201ENST00000603072 338 ntBASIC2.03□□□□□ -2.08
HOXA1P49639 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.03□□□□□ -2.08
HOXA1P49639 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HOXA1P49639 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms