Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC02471-203ENST00000641941 4752 ntBASIC4.09□□□□□ -1.76
VARSP26640 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.09□□□□□ -1.76
VARSP26640 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
VARSP26640 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VARSP26640 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
VARSP26640 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VARSP26640 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VARSP26640 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VARSP26640 Y_RNA.323-201ENST00000365157 109 ntBASIC4.08□□□□□ -1.76
VARSP26640 Y_RNA.366-201ENST00000365540 102 ntBASIC4.08□□□□□ -1.76
VARSP26640 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VARSP26640 RNU1-13P-201ENST00000384499 162 ntBASIC4.08□□□□□ -1.76
VARSP26640 MIR554-201ENST00000384874 96 ntBASIC4.08□□□□□ -1.76
VARSP26640 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.08□□□□□ -1.76
VARSP26640 RPS29P19-201ENST00000479709 171 ntBASIC4.08□□□□□ -1.76
VARSP26640 RPL30P14-201ENST00000482744 348 ntBASIC4.08□□□□□ -1.76
VARSP26640 RNU6-109P-201ENST00000516364 107 ntBASIC4.08□□□□□ -1.76
VARSP26640 RNU6-184P-201ENST00000516514 107 ntBASIC4.08□□□□□ -1.76
VARSP26640 RNU6-504P-201ENST00000516568 104 ntBASIC4.08□□□□□ -1.76
VARSP26640 AC079598.5-201ENST00000547460 117 ntBASIC4.08□□□□□ -1.76
VARSP26640 TVP23BP1-201ENST00000557500 617 ntBASIC4.08□□□□□ -1.76
VARSP26640 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VARSP26640 AP001486.2-201ENST00000561652 5113 ntBASIC4.08□□□□□ -1.76
VARSP26640 AC008739.2-201ENST00000597006 317 ntBASIC4.08□□□□□ -1.76
VARSP26640 MIR7702-201ENST00000621931 59 ntBASIC4.08□□□□□ -1.76
VARSP26640 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.08□□□□□ -1.76
VARSP26640 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VARSP26640 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
VARSP26640 AL353746.1-201ENST00000566293 6881 ntBASIC4.08□□□□□ -1.76
VARSP26640 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VARSP26640 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.08□□□□□ -1.76
VARSP26640 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VARSP26640 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VARSP26640 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
VARSP26640 SPRR2C-201ENST00000290702 219 ntBASIC4.07□□□□□ -1.76
VARSP26640 Y_RNA.220-201ENST00000364244 109 ntBASIC4.07□□□□□ -1.76
VARSP26640 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VARSP26640 RNA5SP317-201ENST00000410176 116 ntBASIC4.07□□□□□ -1.76
VARSP26640 RNA5SP311-201ENST00000411290 116 ntBASIC4.07□□□□□ -1.76
VARSP26640 RNU7-170P-201ENST00000459303 61 ntBASIC4.07□□□□□ -1.76
VARSP26640 RPL32P34-201ENST00000486380 400 ntBASIC4.07□□□□□ -1.76
VARSP26640 RNA5SP315-201ENST00000516340 116 ntBASIC4.07□□□□□ -1.76
VARSP26640 RNU6-113P-201ENST00000516653 101 ntBASIC4.07□□□□□ -1.76
VARSP26640 RNA5SP312-201ENST00000517068 116 ntBASIC4.07□□□□□ -1.76
VARSP26640 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.07□□□□□ -1.76
VARSP26640 AC011604.1-201ENST00000545978 196 ntBASIC4.07□□□□□ -1.76
VARSP26640 AC107294.3-201ENST00000609211 526 ntBASIC4.07□□□□□ -1.76
VARSP26640 JPX_2.1-201ENST00000614161 69 ntBASIC4.07□□□□□ -1.76
VARSP26640 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.07□□□□□ -1.76
VARSP26640 AC006111.3-201ENST00000622137 383 ntBASIC4.07□□□□□ -1.76
VARSP26640 AC006435.5-201ENST00000624486 112 ntBASIC4.07□□□□□ -1.76
VARSP26640 AC090517.3-201ENST00000625170 141 ntBASIC4.07□□□□□ -1.76
VARSP26640 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
VARSP26640 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.07□□□□□ -1.76
VARSP26640 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VARSP26640 AC010680.1-201ENST00000590024 3590 ntBASIC4.07□□□□□ -1.76
VARSP26640 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.07□□□□□ -1.76
VARSP26640 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VARSP26640 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VARSP26640 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
VARSP26640 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.06□□□□□ -1.76
VARSP26640 RNU6-198P-201ENST00000384258 104 ntBASIC4.06□□□□□ -1.76
VARSP26640 MIR1179-201ENST00000408703 91 ntBASIC4.06□□□□□ -1.76
VARSP26640 AC063976.3-201ENST00000426849 329 ntBASIC4.06□□□□□ -1.76
VARSP26640 RNU7-23P-201ENST00000459465 62 ntBASIC4.06□□□□□ -1.76
VARSP26640 AP002884.2-201ENST00000471647 395 ntBASIC4.06□□□□□ -1.76
VARSP26640 MIR3117-201ENST00000584034 78 ntBASIC4.06□□□□□ -1.76
VARSP26640 U7.8-201ENST00000619968 63 ntBASIC4.06□□□□□ -1.76
VARSP26640 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VARSP26640 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
VARSP26640 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
VARSP26640 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.05□□□□□ -1.76
VARSP26640 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VARSP26640 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VARSP26640 Z82217.1-201ENST00000625157 8149 ntBASIC4.05□□□□□ -1.76
VARSP26640 MIR590-201ENST00000385008 97 ntBASIC4.05□□□□□ -1.76
VARSP26640 MIR181B1-201ENST00000385240 110 ntBASIC4.05□□□□□ -1.76
VARSP26640 RPL30P4-201ENST00000429309 333 ntBASIC4.05□□□□□ -1.76
VARSP26640 AC018634.1-201ENST00000437554 401 ntBASIC4.05□□□□□ -1.76
VARSP26640 AC010099.1-201ENST00000455434 375 ntBASIC4.05□□□□□ -1.76
VARSP26640 AC021205.2-201ENST00000480069 347 ntBASIC4.05□□□□□ -1.76
VARSP26640 RN7SKP12-201ENST00000516275 143 ntBASIC4.05□□□□□ -1.76
VARSP26640 RNA5SP143-201ENST00000516936 115 ntBASIC4.05□□□□□ -1.76
VARSP26640 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.05□□□□□ -1.76
VARSP26640 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.05□□□□□ -1.76
VARSP26640 MIR4474-201ENST00000579189 78 ntBASIC4.05□□□□□ -1.76
VARSP26640 AC006130.2-201ENST00000586202 326 ntBASIC4.05□□□□□ -1.76
VARSP26640 MIR6075-201ENST00000620782 95 ntBASIC4.05□□□□□ -1.76
VARSP26640 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VARSP26640 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.05□□□□□ -1.76
VARSP26640 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VARSP26640 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.05□□□□□ -1.76
VARSP26640 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.05□□□□□ -1.76
VARSP26640 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.04□□□□□ -1.76
VARSP26640 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.04□□□□□ -1.76
VARSP26640 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.04□□□□□ -1.76
VARSP26640 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VARSP26640 MIR29B2-201ENST00000385055 81 ntBASIC4.04□□□□□ -1.76
VARSP26640 MIR1294-201ENST00000408503 142 ntBASIC4.04□□□□□ -1.76
VARSP26640 RNU6-592P-201ENST00000411333 103 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms