Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 MIR4635-201ENST00000583759 79 ntBASIC2.74□□□□□ -1.97
RHOP08100 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.74□□□□□ -1.97
RHOP08100 AC009779.6-201ENST00000603972 165 ntBASIC2.74□□□□□ -1.97
RHOP08100 BX284668.6-201ENST00000606899 438 ntBASIC2.74□□□□□ -1.97
RHOP08100 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.74□□□□□ -1.97
RHOP08100 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.74□□□□□ -1.97
RHOP08100 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RHOP08100 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.73□□□□□ -1.97
RHOP08100 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
RHOP08100 MIR410-201ENST00000362222 80 ntBASIC2.73□□□□□ -1.97
RHOP08100 RNU6-1266P-201ENST00000362794 105 ntBASIC2.73□□□□□ -1.97
RHOP08100 Y_RNA.286-201ENST00000364813 102 ntBASIC2.73□□□□□ -1.97
RHOP08100 RNU6-1180P-201ENST00000364935 107 ntBASIC2.73□□□□□ -1.97
RHOP08100 SNORA70B-201ENST00000384210 135 ntBASIC2.73□□□□□ -1.97
RHOP08100 RNU6-21P-201ENST00000384710 107 ntBASIC2.73□□□□□ -1.97
RHOP08100 MIR549A-201ENST00000385268 96 ntBASIC2.73□□□□□ -1.97
RHOP08100 RNU6-625P-201ENST00000459412 107 ntBASIC2.73□□□□□ -1.97
RHOP08100 SNORA9.3-201ENST00000516383 129 ntBASIC2.73□□□□□ -1.97
RHOP08100 RNU7-110P-201ENST00000516891 62 ntBASIC2.73□□□□□ -1.97
RHOP08100 DEFB131C-201ENST00000528817 165 ntBASIC2.73□□□□□ -1.97
RHOP08100 RRN3P3-201ENST00000549207 578 ntBASIC2.73□□□□□ -1.97
RHOP08100 SNORD53-201ENST00000579969 78 ntBASIC2.73□□□□□ -1.97
RHOP08100 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.73□□□□□ -1.97
RHOP08100 AC005176.2-201ENST00000596933 147 ntBASIC2.73□□□□□ -1.97
RHOP08100 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.73□□□□□ -1.97
RHOP08100 AC010900.2-201ENST00000604508 210 ntBASIC2.73□□□□□ -1.97
RHOP08100 AL590240.4-201ENST00000616908 390 ntBASIC2.73□□□□□ -1.97
RHOP08100 AC005562.2-201ENST00000618264 111 ntBASIC2.73□□□□□ -1.97
RHOP08100 CTSLP2-204ENST00000629029 392 ntBASIC2.73□□□□□ -1.97
RHOP08100 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RHOP08100 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RHOP08100 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.73□□□□□ -1.97
RHOP08100 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.73□□□□□ -1.97
RHOP08100 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RHOP08100 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RHOP08100 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RHOP08100 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
RHOP08100 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.72□□□□□ -1.97
RHOP08100 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RHOP08100 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RHOP08100 SNORD27-201ENST00000363981 72 ntBASIC2.72□□□□□ -1.97
RHOP08100 SNORD56.5-201ENST00000364281 72 ntBASIC2.72□□□□□ -1.97
RHOP08100 RNU6-1175P-201ENST00000365200 107 ntBASIC2.72□□□□□ -1.97
RHOP08100 MIR627-201ENST00000384979 97 ntBASIC2.72□□□□□ -1.97
RHOP08100 SNORA53-201ENST00000391141 249 ntBASIC2.72□□□□□ -1.97
RHOP08100 SNORA26.7-201ENST00000391288 122 ntBASIC2.72□□□□□ -1.97
RHOP08100 FO393413.1-201ENST00000402892 195 ntBASIC2.72□□□□□ -1.97
RHOP08100 RNU4-30P-201ENST00000410245 143 ntBASIC2.72□□□□□ -1.97
RHOP08100 ELOCP21-201ENST00000412558 336 ntBASIC2.72□□□□□ -1.97
RHOP08100 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.72□□□□□ -1.97
RHOP08100 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.72□□□□□ -1.97
RHOP08100 Z98742.2-201ENST00000431564 187 ntBASIC2.72□□□□□ -1.97
RHOP08100 RPS29P6-201ENST00000438196 145 ntBASIC2.72□□□□□ -1.97
RHOP08100 UBBP3-201ENST00000445497 241 ntBASIC2.72□□□□□ -1.97
RHOP08100 SRIP1-201ENST00000489235 288 ntBASIC2.72□□□□□ -1.97
RHOP08100 RNU1-41P-201ENST00000516161 162 ntBASIC2.72□□□□□ -1.97
RHOP08100 RNU4-71P-201ENST00000516258 113 ntBASIC2.72□□□□□ -1.97
RHOP08100 RNA5SP320-201ENST00000516263 124 ntBASIC2.72□□□□□ -1.97
RHOP08100 RNU1-48P-201ENST00000516400 162 ntBASIC2.72□□□□□ -1.97
RHOP08100 RNA5SP24-201ENST00000516478 95 ntBASIC2.72□□□□□ -1.97
RHOP08100 RNU2-31P-201ENST00000516954 155 ntBASIC2.72□□□□□ -1.97
RHOP08100 AC109329.2-201ENST00000519658 482 ntBASIC2.72□□□□□ -1.97
RHOP08100 AC103810.1-201ENST00000579873 453 ntBASIC2.72□□□□□ -1.97
RHOP08100 MIR4765-201ENST00000585007 77 ntBASIC2.72□□□□□ -1.97
RHOP08100 AC022441.3-201ENST00000605737 136 ntBASIC2.72□□□□□ -1.97
RHOP08100 TCL6_2.1-201ENST00000615162 119 ntBASIC2.72□□□□□ -1.97
RHOP08100 AC064859.1-201ENST00000624741 174 ntBASIC2.72□□□□□ -1.97
RHOP08100 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.71□□□□□ -1.98
RHOP08100 RNU6-486P-201ENST00000363116 107 ntBASIC2.71□□□□□ -1.98
RHOP08100 Y_RNA.136-201ENST00000363444 102 ntBASIC2.71□□□□□ -1.98
RHOP08100 SNORA68.1-201ENST00000364537 132 ntBASIC2.71□□□□□ -1.98
RHOP08100 RNU6-200P-201ENST00000364743 107 ntBASIC2.71□□□□□ -1.98
RHOP08100 RNU6-338P-201ENST00000383888 105 ntBASIC2.71□□□□□ -1.98
RHOP08100 AL033519.2-201ENST00000403958 392 ntBASIC2.71□□□□□ -1.98
RHOP08100 AC004866.1-201ENST00000411748 78 ntBASIC2.71□□□□□ -1.98
RHOP08100 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.71□□□□□ -1.98
RHOP08100 RAB28P5-201ENST00000427490 651 ntBASIC2.71□□□□□ -1.98
RHOP08100 MICF-203ENST00000432679 129 ntBASIC2.71□□□□□ -1.98
RHOP08100 AL121890.1-201ENST00000435457 205 ntBASIC2.71□□□□□ -1.98
RHOP08100 AC009237.7-201ENST00000447357 229 ntBASIC2.71□□□□□ -1.98
RHOP08100 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.71□□□□□ -1.98
RHOP08100 HMGB3P17-201ENST00000504195 649 ntBASIC2.71□□□□□ -1.98
RHOP08100 SCARNA17.1-201ENST00000516211 143 ntBASIC2.71□□□□□ -1.98
RHOP08100 SCARNA17.2-201ENST00000516334 143 ntBASIC2.71□□□□□ -1.98
RHOP08100 Y_RNA.700-201ENST00000516806 100 ntBASIC2.71□□□□□ -1.98
RHOP08100 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.71□□□□□ -1.98
RHOP08100 RPL17P51-201ENST00000605218 238 ntBASIC2.71□□□□□ -1.98
RHOP08100 SCARNA17.4-201ENST00000614296 143 ntBASIC2.71□□□□□ -1.98
RHOP08100 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
RHOP08100 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.71□□□□□ -1.98
RHOP08100 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RHOP08100 SNORD32B-201ENST00000364460 84 ntBASIC2.7□□□□□ -1.98
RHOP08100 Y_RNA.569-201ENST00000384749 103 ntBASIC2.7□□□□□ -1.98
RHOP08100 MIR29B2-201ENST00000385055 81 ntBASIC2.7□□□□□ -1.98
RHOP08100 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RHOP08100 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RHOP08100 RNU2-14P-201ENST00000411053 191 ntBASIC2.7□□□□□ -1.98
RHOP08100 RPL23AP36-201ENST00000413895 458 ntBASIC2.7□□□□□ -1.98
RHOP08100 RN7SL499P-201ENST00000481141 276 ntBASIC2.7□□□□□ -1.98
RHOP08100 SCARNA24.2-201ENST00000516968 130 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms