Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 SNORD73A-201ENST00000386062 65 ntBASIC0.92□□□□□ -2.26
BRD4O60885 AL161935.2-201ENST00000414627 60 ntBASIC0.92□□□□□ -2.26
BRD4O60885 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.92□□□□□ -2.26
BRD4O60885 AC007547.1-201ENST00000462177 490 ntBASIC0.92□□□□□ -2.26
BRD4O60885 HMGN2P9-201ENST00000476875 229 ntBASIC0.92□□□□□ -2.26
BRD4O60885 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.92□□□□□ -2.26
BRD4O60885 AC010424.1-201ENST00000506336 297 ntBASIC0.92□□□□□ -2.26
BRD4O60885 AC010486.3-201ENST00000511602 785 ntBASIC0.92□□□□□ -2.26
BRD4O60885 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.92□□□□□ -2.26
BRD4O60885 RNA5SP401-201ENST00000515920 127 ntBASIC0.92□□□□□ -2.26
BRD4O60885 RNU6-189P-201ENST00000516120 101 ntBASIC0.92□□□□□ -2.26
BRD4O60885 RNU6-612P-201ENST00000516909 102 ntBASIC0.92□□□□□ -2.26
BRD4O60885 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
BRD4O60885 MIR6086-201ENST00000638065 55 ntBASIC0.92□□□□□ -2.26
BRD4O60885 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
BRD4O60885 RNU6-227P-201ENST00000362865 103 ntBASIC0.91□□□□□ -2.26
BRD4O60885 RNU4-66P-201ENST00000365199 138 ntBASIC0.91□□□□□ -2.26
BRD4O60885 Y_RNA.381-201ENST00000365666 102 ntBASIC0.91□□□□□ -2.26
BRD4O60885 SNORA36A-201ENST00000384221 132 ntBASIC0.91□□□□□ -2.26
BRD4O60885 Y_RNA.481-201ENST00000384373 102 ntBASIC0.91□□□□□ -2.26
BRD4O60885 Y_RNA.582-201ENST00000391023 95 ntBASIC0.91□□□□□ -2.26
BRD4O60885 RNU4-55P-201ENST00000410731 137 ntBASIC0.91□□□□□ -2.26
BRD4O60885 RNU2-7P-201ENST00000410794 178 ntBASIC0.91□□□□□ -2.26
BRD4O60885 RNU2-64P-201ENST00000411315 191 ntBASIC0.91□□□□□ -2.26
BRD4O60885 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.91□□□□□ -2.26
BRD4O60885 CDK8P2-201ENST00000415020 547 ntBASIC0.91□□□□□ -2.26
BRD4O60885 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.91□□□□□ -2.26
BRD4O60885 HSPE1P13-201ENST00000451143 297 ntBASIC0.91□□□□□ -2.26
BRD4O60885 AC098826.2-201ENST00000452011 651 ntBASIC0.91□□□□□ -2.26
BRD4O60885 U8.21-201ENST00000459536 136 ntBASIC0.91□□□□□ -2.26
BRD4O60885 AC025465.4-201ENST00000513422 638 ntBASIC0.91□□□□□ -2.26
BRD4O60885 SCARNA16.2-201ENST00000516520 172 ntBASIC0.91□□□□□ -2.26
BRD4O60885 AC026407.1-201ENST00000518369 204 ntBASIC0.91□□□□□ -2.26
BRD4O60885 CYCSP23-201ENST00000519781 313 ntBASIC0.91□□□□□ -2.26
BRD4O60885 RNU6-323P-201ENST00000521915 107 ntBASIC0.91□□□□□ -2.26
BRD4O60885 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.91□□□□□ -2.26
BRD4O60885 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.91□□□□□ -2.26
BRD4O60885 HMGB1P33-201ENST00000563485 527 ntBASIC0.91□□□□□ -2.26
BRD4O60885 AC015688.6-201ENST00000577737 104 ntBASIC0.91□□□□□ -2.26
BRD4O60885 MIR4424-201ENST00000585257 86 ntBASIC0.91□□□□□ -2.26
BRD4O60885 AP003465.2-201ENST00000602571 373 ntBASIC0.91□□□□□ -2.26
BRD4O60885 RN7SKP299-201ENST00000606679 301 ntBASIC0.91□□□□□ -2.26
BRD4O60885 BX284668.6-201ENST00000606899 438 ntBASIC0.91□□□□□ -2.26
BRD4O60885 AL357078.3-201ENST00000607528 618 ntBASIC0.91□□□□□ -2.26
BRD4O60885 AC017083.3-201ENST00000609955 700 ntBASIC0.91□□□□□ -2.26
BRD4O60885 AC090582.1-201ENST00000636321 199 ntBASIC0.91□□□□□ -2.26
BRD4O60885 MTND4P12-201ENST00000498999 1377 ntBASIC0.9□□□□□ -2.26
BRD4O60885 AP000568.1-201ENST00000282964 442 ntBASIC0.9□□□□□ -2.27
BRD4O60885 Y_RNA.294-201ENST00000364916 102 ntBASIC0.9□□□□□ -2.27
BRD4O60885 SNORA25-201ENST00000384384 134 ntBASIC0.9□□□□□ -2.27
BRD4O60885 SNORA12.2-201ENST00000391040 156 ntBASIC0.9□□□□□ -2.27
BRD4O60885 AL353193.1-201ENST00000421444 268 ntBASIC0.9□□□□□ -2.27
BRD4O60885 SNX2P2-201ENST00000424553 323 ntBASIC0.9□□□□□ -2.27
BRD4O60885 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.9□□□□□ -2.27
BRD4O60885 AC245047.4-201ENST00000433189 144 ntBASIC0.9□□□□□ -2.27
BRD4O60885 MTND5P15-201ENST00000434246 349 ntBASIC0.9□□□□□ -2.27
BRD4O60885 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.9□□□□□ -2.27
BRD4O60885 AC117454.1-201ENST00000491120 168 ntBASIC0.9□□□□□ -2.27
BRD4O60885 AC091885.1-201ENST00000506658 268 ntBASIC0.9□□□□□ -2.27
BRD4O60885 CCDC34P1-201ENST00000507441 517 ntBASIC0.9□□□□□ -2.27
BRD4O60885 AC079140.3-201ENST00000511111 550 ntBASIC0.9□□□□□ -2.27
BRD4O60885 Y_RNA.688-201ENST00000516565 95 ntBASIC0.9□□□□□ -2.27
BRD4O60885 AC016256.1-201ENST00000547971 354 ntBASIC0.9□□□□□ -2.27
BRD4O60885 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.9□□□□□ -2.27
BRD4O60885 AC092747.3-201ENST00000603769 301 ntBASIC0.9□□□□□ -2.27
BRD4O60885 AC009994.1-201ENST00000606889 253 ntBASIC0.9□□□□□ -2.27
BRD4O60885 AC104458.1-201ENST00000608243 463 ntBASIC0.9□□□□□ -2.27
BRD4O60885 AC103705.1-201ENST00000619013 241 ntBASIC0.9□□□□□ -2.27
BRD4O60885 AC243829.3-201ENST00000622177 108 ntBASIC0.9□□□□□ -2.27
BRD4O60885 AC139792.3-201ENST00000623525 224 ntBASIC0.9□□□□□ -2.27
BRD4O60885 AC009033.1-201ENST00000624279 431 ntBASIC0.9□□□□□ -2.27
BRD4O60885 SNORA43.4-201ENST00000629559 138 ntBASIC0.9□□□□□ -2.27
BRD4O60885 RNU6-545P-201ENST00000362681 104 ntBASIC0.89□□□□□ -2.27
BRD4O60885 RNU6-562P-201ENST00000362731 107 ntBASIC0.89□□□□□ -2.27
BRD4O60885 RNU1-76P-201ENST00000362903 159 ntBASIC0.89□□□□□ -2.27
BRD4O60885 RNU6-1322P-201ENST00000364309 107 ntBASIC0.89□□□□□ -2.27
BRD4O60885 Y_RNA.359-201ENST00000365498 102 ntBASIC0.89□□□□□ -2.27
BRD4O60885 RNU6-214P-201ENST00000384130 107 ntBASIC0.89□□□□□ -2.27
BRD4O60885 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
BRD4O60885 MIR300-201ENST00000401138 83 ntBASIC0.89□□□□□ -2.27
BRD4O60885 MTCO1P21-201ENST00000416634 589 ntBASIC0.89□□□□□ -2.27
BRD4O60885 ARL5AP1-201ENST00000418991 388 ntBASIC0.89□□□□□ -2.27
BRD4O60885 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.89□□□□□ -2.27
BRD4O60885 MTND3P9-201ENST00000429526 346 ntBASIC0.89□□□□□ -2.27
BRD4O60885 AC092628.1-201ENST00000436250 252 ntBASIC0.89□□□□□ -2.27
BRD4O60885 AC016925.1-201ENST00000458303 298 ntBASIC0.89□□□□□ -2.27
BRD4O60885 TRBVA-201ENST00000498804 316 ntBASIC0.89□□□□□ -2.27
BRD4O60885 RPL39P5-202ENST00000512505 151 ntBASIC0.89□□□□□ -2.27
BRD4O60885 RNU6-1038P-201ENST00000516516 104 ntBASIC0.89□□□□□ -2.27
BRD4O60885 AC064836.2-201ENST00000609491 462 ntBASIC0.89□□□□□ -2.27
BRD4O60885 AC027335.2-201ENST00000624030 375 ntBASIC0.89□□□□□ -2.27
BRD4O60885 MIR340-201ENST00000362125 95 ntBASIC0.88□□□□□ -2.27
BRD4O60885 RNU6-862P-201ENST00000362804 105 ntBASIC0.88□□□□□ -2.27
BRD4O60885 RNU6-1329P-201ENST00000365664 107 ntBASIC0.88□□□□□ -2.27
BRD4O60885 RNU6-877P-201ENST00000383868 107 ntBASIC0.88□□□□□ -2.27
BRD4O60885 RNU6-418P-201ENST00000384035 107 ntBASIC0.88□□□□□ -2.27
BRD4O60885 RNU6-38P-201ENST00000384085 107 ntBASIC0.88□□□□□ -2.27
BRD4O60885 RNA5SP494-201ENST00000410653 129 ntBASIC0.88□□□□□ -2.27
BRD4O60885 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.88□□□□□ -2.27
BRD4O60885 AC098934.3-201ENST00000430450 190 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms