Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RNU6-649P-201ENST00000384463 107 ntBASIC4.08□□□□□ -1.76
GFRA3O60609 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.08□□□□□ -1.76
GFRA3O60609 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA3O60609 RNU6-613P-201ENST00000410412 108 ntBASIC4.08□□□□□ -1.76
GFRA3O60609 RNA5SP144-201ENST00000410846 116 ntBASIC4.08□□□□□ -1.76
GFRA3O60609 UBE3AP2-201ENST00000429033 2259 ntBASIC4.08□□□□□ -1.76
GFRA3O60609 RPS3P1-201ENST00000456781 192 ntBASIC4.08□□□□□ -1.76
GFRA3O60609 AC021739.1-201ENST00000559631 174 ntBASIC4.08□□□□□ -1.76
GFRA3O60609 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA3O60609 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
GFRA3O60609 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GFRA3O60609 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
GFRA3O60609 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
GFRA3O60609 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA3O60609 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.07□□□□□ -1.76
GFRA3O60609 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.07□□□□□ -1.76
GFRA3O60609 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.07□□□□□ -1.76
GFRA3O60609 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA3O60609 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
GFRA3O60609 SNORD115-37-201ENST00000363768 82 ntBASIC4.07□□□□□ -1.76
GFRA3O60609 Y_RNA.247-201ENST00000364500 92 ntBASIC4.07□□□□□ -1.76
GFRA3O60609 RNU6-1163P-201ENST00000364516 107 ntBASIC4.07□□□□□ -1.76
GFRA3O60609 RNU4-16P-201ENST00000364737 141 ntBASIC4.07□□□□□ -1.76
GFRA3O60609 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA3O60609 SNORA12-201ENST00000391162 147 ntBASIC4.07□□□□□ -1.76
GFRA3O60609 RPS12P2-201ENST00000439728 269 ntBASIC4.07□□□□□ -1.76
GFRA3O60609 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.07□□□□□ -1.76
GFRA3O60609 RNU6-687P-201ENST00000516443 89 ntBASIC4.07□□□□□ -1.76
GFRA3O60609 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA3O60609 AC022655.2-201ENST00000577280 318 ntBASIC4.07□□□□□ -1.76
GFRA3O60609 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC4.07□□□□□ -1.76
GFRA3O60609 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA3O60609 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.07□□□□□ -1.76
GFRA3O60609 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA3O60609 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA3O60609 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA3O60609 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
GFRA3O60609 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
GFRA3O60609 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.07□□□□□ -1.76
GFRA3O60609 MAPK10-372ENST00000641954 3413 ntBASIC4.07□□□□□ -1.76
GFRA3O60609 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
GFRA3O60609 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.06□□□□□ -1.76
GFRA3O60609 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
GFRA3O60609 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.06□□□□□ -1.76
GFRA3O60609 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GFRA3O60609 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
GFRA3O60609 RNU6-624P-201ENST00000363411 107 ntBASIC4.06□□□□□ -1.76
GFRA3O60609 MIR153-1-201ENST00000384914 90 ntBASIC4.06□□□□□ -1.76
GFRA3O60609 GNG5P5-201ENST00000420444 220 ntBASIC4.06□□□□□ -1.76
GFRA3O60609 RNU7-153P-201ENST00000516455 62 ntBASIC4.06□□□□□ -1.76
GFRA3O60609 SNORD36C-201ENST00000516733 66 ntBASIC4.06□□□□□ -1.76
GFRA3O60609 RNU6-1231P-201ENST00000517185 103 ntBASIC4.06□□□□□ -1.76
GFRA3O60609 AC087499.8-201ENST00000578406 226 ntBASIC4.06□□□□□ -1.76
GFRA3O60609 RPL17P51-201ENST00000605218 238 ntBASIC4.06□□□□□ -1.76
GFRA3O60609 AC005086.4-201ENST00000623065 213 ntBASIC4.06□□□□□ -1.76
GFRA3O60609 AL512310.12-203ENST00000640543 90 ntBASIC4.06□□□□□ -1.76
GFRA3O60609 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
GFRA3O60609 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
GFRA3O60609 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
GFRA3O60609 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
GFRA3O60609 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA3O60609 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.05□□□□□ -1.76
GFRA3O60609 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.05□□□□□ -1.76
GFRA3O60609 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA3O60609 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA3O60609 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA3O60609 RNU1-108P-201ENST00000362556 161 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 MIR1271-201ENST00000408537 86 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 RPS26P47-201ENST00000427219 348 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 AC099677.2-201ENST00000436385 175 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 RNA5SP103-201ENST00000459503 118 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 RPS27P22-201ENST00000478056 241 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 HMGN1P7-201ENST00000491722 313 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 RNA5SP249-201ENST00000516127 99 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 SNORA25.13-201ENST00000516395 103 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 RNU6-1098P-201ENST00000516772 96 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 RNU6-448P-201ENST00000517052 107 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 AC002984.1-201ENST00000591692 448 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 MIR7151-201ENST00000617477 60 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 AC091932.4-201ENST00000623386 200 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
GFRA3O60609 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA3O60609 AC093831.2-201ENST00000624393 3427 ntBASIC4.05□□□□□ -1.76
GFRA3O60609 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.05□□□□□ -1.76
GFRA3O60609 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
GFRA3O60609 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA3O60609 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
GFRA3O60609 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GFRA3O60609 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
GFRA3O60609 AC004925.1-201ENST00000624256 2706 ntBASIC4.04□□□□□ -1.76
GFRA3O60609 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GFRA3O60609 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.04□□□□□ -1.76
GFRA3O60609 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
GFRA3O60609 AL139811.1-201ENST00000424779 2299 ntBASIC4.04□□□□□ -1.76
GFRA3O60609 Y_RNA.37-201ENST00000362606 108 ntBASIC4.04□□□□□ -1.76
GFRA3O60609 Y_RNA.253-201ENST00000364562 112 ntBASIC4.04□□□□□ -1.76
GFRA3O60609 Y_RNA.351-201ENST00000365436 96 ntBASIC4.04□□□□□ -1.76
GFRA3O60609 MIR9-2-201ENST00000384838 87 ntBASIC4.04□□□□□ -1.76
GFRA3O60609 RPS29P20-201ENST00000489592 171 ntBASIC4.04□□□□□ -1.76
GFRA3O60609 AC108729.3-201ENST00000513484 108 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 468.1 ms