Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.6□□□□□ -1.99
APAF1O14727 AL050343.2-201ENST00000607338 280 ntBASIC2.6□□□□□ -1.99
APAF1O14727 AL160413.1-201ENST00000622780 310 ntBASIC2.6□□□□□ -1.99
APAF1O14727 AC131280.1-202ENST00000624067 4211 ntBASIC2.6□□□□□ -1.99
APAF1O14727 LINC02555-201ENST00000563933 1951 ntBASIC2.6□□□□□ -1.99
APAF1O14727 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
APAF1O14727 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
APAF1O14727 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.59□□□□□ -1.99
APAF1O14727 RNU6-222P-201ENST00000362438 107 ntBASIC2.59□□□□□ -1.99
APAF1O14727 Y_RNA.314-201ENST00000365114 102 ntBASIC2.59□□□□□ -1.99
APAF1O14727 MIR518A2-201ENST00000384966 87 ntBASIC2.59□□□□□ -1.99
APAF1O14727 MIR549A-201ENST00000385268 96 ntBASIC2.59□□□□□ -1.99
APAF1O14727 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
APAF1O14727 Y_RNA.592-201ENST00000410274 109 ntBASIC2.59□□□□□ -1.99
APAF1O14727 Y_RNA.605-201ENST00000410577 105 ntBASIC2.59□□□□□ -1.99
APAF1O14727 AC027575.1-201ENST00000481064 460 ntBASIC2.59□□□□□ -1.99
APAF1O14727 AC067942.3-201ENST00000512025 362 ntBASIC2.59□□□□□ -1.99
APAF1O14727 RNU7-193P-201ENST00000516723 65 ntBASIC2.59□□□□□ -1.99
APAF1O14727 RNU1-40P-201ENST00000516816 164 ntBASIC2.59□□□□□ -1.99
APAF1O14727 RNU1-97P-201ENST00000516872 164 ntBASIC2.59□□□□□ -1.99
APAF1O14727 SNORA31.25-201ENST00000517242 134 ntBASIC2.59□□□□□ -1.99
APAF1O14727 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.59□□□□□ -1.99
APAF1O14727 AC022202.1-201ENST00000613515 211 ntBASIC2.59□□□□□ -1.99
APAF1O14727 MTND4P29-201ENST00000503122 1372 ntBASIC2.59□□□□□ -2
APAF1O14727 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.58□□□□□ -2
APAF1O14727 RNU1-58P-201ENST00000362413 163 ntBASIC2.58□□□□□ -2
APAF1O14727 RNU6-545P-201ENST00000362681 104 ntBASIC2.58□□□□□ -2
APAF1O14727 U3.8-201ENST00000363675 217 ntBASIC2.58□□□□□ -2
APAF1O14727 RNU6-1305P-201ENST00000364353 104 ntBASIC2.58□□□□□ -2
APAF1O14727 SNORA67.2-201ENST00000384300 149 ntBASIC2.58□□□□□ -2
APAF1O14727 AL033519.2-201ENST00000403958 392 ntBASIC2.58□□□□□ -2
APAF1O14727 SNORD23.1-201ENST00000408212 104 ntBASIC2.58□□□□□ -2
APAF1O14727 Y_RNA.595-201ENST00000410403 105 ntBASIC2.58□□□□□ -2
APAF1O14727 AC004866.1-201ENST00000411748 78 ntBASIC2.58□□□□□ -2
APAF1O14727 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.58□□□□□ -2
APAF1O14727 AC007677.1-201ENST00000445757 515 ntBASIC2.58□□□□□ -2
APAF1O14727 RN7SKP49-201ENST00000516675 260 ntBASIC2.58□□□□□ -2
APAF1O14727 AC022868.1-201ENST00000517767 391 ntBASIC2.58□□□□□ -2
APAF1O14727 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.58□□□□□ -2
APAF1O14727 AL080274.1-201ENST00000605565 220 ntBASIC2.58□□□□□ -2
APAF1O14727 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.58□□□□□ -2
APAF1O14727 AC087588.2-201ENST00000617667 426 ntBASIC2.58□□□□□ -2
APAF1O14727 AC090971.5-201ENST00000621102 293 ntBASIC2.58□□□□□ -2
APAF1O14727 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.58□□□□□ -2
APAF1O14727 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.58□□□□□ -2
APAF1O14727 MTND5P35-201ENST00000557537 1720 ntBASIC2.57□□□□□ -2
APAF1O14727 Y_RNA.112-201ENST00000363250 102 ntBASIC2.57□□□□□ -2
APAF1O14727 RNU6-879P-201ENST00000364328 108 ntBASIC2.57□□□□□ -2
APAF1O14727 Y_RNA.395-201ENST00000383945 109 ntBASIC2.57□□□□□ -2
APAF1O14727 RNU6-975P-201ENST00000384296 105 ntBASIC2.57□□□□□ -2
APAF1O14727 RNU6-1235P-201ENST00000384559 107 ntBASIC2.57□□□□□ -2
APAF1O14727 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.57□□□□□ -2
APAF1O14727 MTCO3P19-201ENST00000415864 321 ntBASIC2.57□□□□□ -2
APAF1O14727 MTCO1P44-201ENST00000441935 243 ntBASIC2.57□□□□□ -2
APAF1O14727 Y_RNA.639-201ENST00000458981 102 ntBASIC2.57□□□□□ -2
APAF1O14727 RNU6-498P-201ENST00000459468 107 ntBASIC2.57□□□□□ -2
APAF1O14727 AC091179.3-201ENST00000474761 144 ntBASIC2.57□□□□□ -2
APAF1O14727 HMGN2P9-201ENST00000476875 229 ntBASIC2.57□□□□□ -2
APAF1O14727 AC105758.1-201ENST00000506038 399 ntBASIC2.57□□□□□ -2
APAF1O14727 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
APAF1O14727 AC074133.1-201ENST00000515696 183 ntBASIC2.57□□□□□ -2
APAF1O14727 RNU6-120P-201ENST00000516077 103 ntBASIC2.57□□□□□ -2
APAF1O14727 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.57□□□□□ -2
APAF1O14727 AC091925.1-201ENST00000623204 462 ntBASIC2.57□□□□□ -2
APAF1O14727 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.57□□□□□ -2
APAF1O14727 Y_RNA.39-201ENST00000362620 98 ntBASIC2.56□□□□□ -2
APAF1O14727 RNU6-1164P-201ENST00000364428 107 ntBASIC2.56□□□□□ -2
APAF1O14727 RNA5SP37-201ENST00000365420 130 ntBASIC2.56□□□□□ -2
APAF1O14727 RNU6-1145P-201ENST00000384246 107 ntBASIC2.56□□□□□ -2
APAF1O14727 MIR628-201ENST00000385229 95 ntBASIC2.56□□□□□ -2
APAF1O14727 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.56□□□□□ -2
APAF1O14727 RNU2-20P-201ENST00000410425 191 ntBASIC2.56□□□□□ -2
APAF1O14727 OOSP1P1-201ENST00000423265 274 ntBASIC2.56□□□□□ -2
APAF1O14727 UBL5P3-201ENST00000475112 231 ntBASIC2.56□□□□□ -2
APAF1O14727 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
APAF1O14727 RNA5SP138-201ENST00000365098 114 ntBASIC2.55□□□□□ -2
APAF1O14727 MIR329-1-201ENST00000385028 80 ntBASIC2.55□□□□□ -2
APAF1O14727 AC018865.2-201ENST00000423631 129 ntBASIC2.55□□□□□ -2
APAF1O14727 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.55□□□□□ -2
APAF1O14727 HMGB3P3-201ENST00000510526 400 ntBASIC2.55□□□□□ -2
APAF1O14727 RNU1-117P-201ENST00000517041 158 ntBASIC2.55□□□□□ -2
APAF1O14727 AC125232.2-201ENST00000592457 143 ntBASIC2.55□□□□□ -2
APAF1O14727 VN1R91P-201ENST00000594377 169 ntBASIC2.55□□□□□ -2
APAF1O14727 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
APAF1O14727 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.54□□□□□ -2
APAF1O14727 SNORD114-1-201ENST00000362705 72 ntBASIC2.54□□□□□ -2
APAF1O14727 SNORD115-3-201ENST00000363100 82 ntBASIC2.54□□□□□ -2
APAF1O14727 RNU6-23P-201ENST00000363283 107 ntBASIC2.54□□□□□ -2
APAF1O14727 RNU4-42P-201ENST00000364738 142 ntBASIC2.54□□□□□ -2
APAF1O14727 SNORD42.2-201ENST00000365570 69 ntBASIC2.54□□□□□ -2
APAF1O14727 MRPS18CP6-201ENST00000423587 223 ntBASIC2.54□□□□□ -2
APAF1O14727 AC139712.2-201ENST00000424302 339 ntBASIC2.54□□□□□ -2
APAF1O14727 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.54□□□□□ -2
APAF1O14727 MTND2P29-201ENST00000438595 412 ntBASIC2.54□□□□□ -2
APAF1O14727 AC010531.2-201ENST00000465012 153 ntBASIC2.54□□□□□ -2
APAF1O14727 RNU6-856P-201ENST00000516959 98 ntBASIC2.54□□□□□ -2
APAF1O14727 RNU2-19P-201ENST00000517288 84 ntBASIC2.54□□□□□ -2
APAF1O14727 AL442163.3-201ENST00000554110 156 ntBASIC2.54□□□□□ -2
APAF1O14727 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.54□□□□□ -2
APAF1O14727 AC007229.1-201ENST00000590455 412 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms