Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 RNA5SP387-201ENST00000364226 106 ntBASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 SNORD32B-201ENST00000364460 84 ntBASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 SNORA70.4-201ENST00000365509 134 ntBASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 MIR181A2-201ENST00000384863 110 ntBASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 MIR1283-1-201ENST00000408494 87 ntBASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 SNRPGP5-201ENST00000456003 220 ntBASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 AC080013.2-201ENST00000460866 323 ntBASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 TRBV12-2-201ENST00000489763 344 ntBASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 RNA5SP164-201ENST00000516533 110 ntBASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 uc_338.4-201ENST00000616635 176 ntBASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGC4Q9Y5F7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 MAPK10-372ENST00000641954 3413 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 Y_RNA.52-201ENST00000362760 96 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 RNU4-13P-201ENST00000364019 141 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 U8.11-201ENST00000384699 133 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 RNU6ATAC-201ENST00000408749 126 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 RNU6-554P-201ENST00000410466 106 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 SNORA57.3-201ENST00000411095 141 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 U8.18-201ENST00000459285 133 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 SNORD77.4-201ENST00000516158 81 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 SNORA18.4-201ENST00000516440 124 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 RPL23AP91-201ENST00000569211 455 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 AL929325.1-201ENST00000603096 117 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 AC097639.2-201ENST00000603159 172 ntBASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGC4Q9Y5F7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 Y_RNA.333-201ENST00000365274 102 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 RNU6-750P-201ENST00000390946 107 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 AC023449.1-201ENST00000454464 154 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 AL133162.1-201ENST00000463228 453 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 AC010531.2-201ENST00000465012 153 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 RPL36AP48-201ENST00000485521 314 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 RNU1-61P-201ENST00000516107 151 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 RNU6-412P-201ENST00000516434 106 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 AC015720.1-201ENST00000565251 277 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 MIR4444-1-201ENST00000581696 74 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 AC105245.1-201ENST00000581934 244 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 MIR4444-2-201ENST00000584390 74 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 AC068647.1-201ENST00000489539 2265 ntBASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGC4Q9Y5F7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 MFSD8-236ENST00000641509 4050 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 SNORD46.1-201ENST00000364139 104 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 RNU6-905P-201ENST00000384434 107 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 MIR300-201ENST00000401138 83 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 RNU7-14P-201ENST00000459331 62 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 RNU6-221P-201ENST00000459541 99 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 AC008155.2-201ENST00000464337 397 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 AC018630.3-201ENST00000542637 96 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 MIR5187-201ENST00000583479 76 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 MIR4753-201ENST00000585119 83 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 AC244505.7-201ENST00000599675 272 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 AC008739.3-201ENST00000603262 127 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 MIR6076-201ENST00000617521 113 ntBASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PCDHGC4Q9Y5F7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGC4Q9Y5F7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHGC4Q9Y5F7 RNU6-525P-201ENST00000363685 104 ntBASIC3.77□□□□□ -1.81
PCDHGC4Q9Y5F7 Y_RNA.281-201ENST00000364774 94 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms