Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 MIR29C-201ENST00000385231 88 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 SUMO1P4-201ENST00000429430 302 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 HMGN2P9-201ENST00000476875 229 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 RNU6-948P-201ENST00000516374 107 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 RNU1-117P-201ENST00000517041 158 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 MIR4435-1-201ENST00000582552 80 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 MIR4719-201ENST00000585233 84 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 AL031274.2-201ENST00000599419 203 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 AL356055.1-201ENST00000602528 446 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 AL078596.1-201ENST00000624856 447 ntBASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
LSM4Q9Y4Z0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 AC005592.1-201ENST00000566527 1640 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 MIR340-201ENST00000362125 95 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 Y_RNA.148-201ENST00000363557 117 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 Y_RNA.415-201ENST00000384012 112 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 RNU6-975P-201ENST00000384296 105 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 SNORD12B-201ENST00000410433 91 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 AC074290.1-201ENST00000448883 135 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 AC112492.4-201ENST00000456549 352 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 AC067942.3-201ENST00000512025 362 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 RNU2-34P-201ENST00000516534 121 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 AC079600.2-201ENST00000550076 130 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 HSBP1P1-201ENST00000555205 166 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 MIR5194-201ENST00000582634 120 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 AC245884.12-201ENST00000615364 59 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 AC009487.4-201ENST00000624969 3585 ntBASIC2.14□□□□□ -2.07
LSM4Q9Y4Z0 AC091812.1-201ENST00000432235 1948 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 SNORA3A-201ENST00000364113 130 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 RNU6-1164P-201ENST00000364428 107 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 SNORD87-201ENST00000364849 89 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 AC117470.1-201ENST00000381974 330 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 DEFA7P-201ENST00000382676 285 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 Y_RNA.526-201ENST00000384572 110 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 AL356057.3-201ENST00000402607 340 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 RNU1-131P-201ENST00000458943 161 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 SNORD109B-201ENST00000458961 67 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 SNORD109A-201ENST00000459128 67 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 RNU6-1012P-201ENST00000516606 109 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 AK6P2-201ENST00000549020 471 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 AL442663.2-201ENST00000554385 511 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 MIR6715A-201ENST00000615929 79 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 AC010297.1-201ENST00000623948 149 ntBASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LSM4Q9Y4Z0 LINC02555-201ENST00000563933 1951 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 MIR6073-201ENST00000352083 89 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 Y_RNA.216-201ENST00000364205 93 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 SNORD14.1-201ENST00000365609 90 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 XGY1-201ENST00000381172 446 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 RNU6-418P-201ENST00000384035 107 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 RNU6-708P-201ENST00000384217 107 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 MIR196B-201ENST00000384852 84 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 MIR9-1-201ENST00000385198 89 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 MIR548B-201ENST00000385247 97 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 HMGN2P39-201ENST00000398005 273 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 MRPL42P3-201ENST00000401492 326 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 RNU2-52P-201ENST00000410680 190 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 RNA5SP270-201ENST00000411361 118 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 HMGN2P35-201ENST00000412164 270 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 ELOCP21-201ENST00000412558 336 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 AL357134.1-201ENST00000445848 426 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 UQCRBP2-201ENST00000447827 297 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 RNU7-57P-201ENST00000459540 60 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 AC010531.2-201ENST00000465012 153 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 AC018448.1-201ENST00000552843 316 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 MIR4446-201ENST00000578505 67 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 RPS29P30-201ENST00000600975 111 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 AL357075.2-201ENST00000614906 189 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LSM4Q9Y4Z0 Y_RNA.498-201ENST00000384460 102 ntBASIC2.11□□□□□ -2.07
LSM4Q9Y4Z0 RNU6-1235P-201ENST00000384559 107 ntBASIC2.11□□□□□ -2.07
LSM4Q9Y4Z0 RNU6-160P-201ENST00000384591 107 ntBASIC2.11□□□□□ -2.07
LSM4Q9Y4Z0 SNORD78.2-201ENST00000391076 69 ntBASIC2.11□□□□□ -2.07
LSM4Q9Y4Z0 AC139712.2-201ENST00000424302 339 ntBASIC2.11□□□□□ -2.07
LSM4Q9Y4Z0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.11□□□□□ -2.07
LSM4Q9Y4Z0 RNU6-498P-201ENST00000459468 107 ntBASIC2.11□□□□□ -2.07
LSM4Q9Y4Z0 SRIP1-201ENST00000489235 288 ntBASIC2.11□□□□□ -2.07
LSM4Q9Y4Z0 SNORA40.9-201ENST00000515895 93 ntBASIC2.11□□□□□ -2.07
LSM4Q9Y4Z0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms