Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NOD1Q9Y239 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NOD1Q9Y239 AL159152.1-201ENST00000635019 2587 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 RNU6-271P-201ENST00000363858 105 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 SNORD116-14-201ENST00000383894 92 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 SNORD116-17-201ENST00000383929 92 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 SNORD116-15-201ENST00000384445 92 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 Y_RNA.521-201ENST00000384560 114 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 SNORD116-19-201ENST00000384729 92 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 AC009414.1-201ENST00000427200 443 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 RPL23AP58-201ENST00000440453 469 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 RNU7-197P-201ENST00000458836 62 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 RN7SKP57-201ENST00000517248 293 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.02□□□□□ -1.77
NOD1Q9Y239 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.02□□□□□ -1.77
NOD1Q9Y239 AP003357.1-201ENST00000604497 148 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 AC012640.5-201ENST00000623897 319 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 MIR6844-201ENST00000637122 62 ntBASIC4.02□□□□□ -1.77
NOD1Q9Y239 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.02□□□□□ -1.77
NOD1Q9Y239 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NOD1Q9Y239 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.01□□□□□ -1.77
NOD1Q9Y239 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NOD1Q9Y239 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NOD1Q9Y239 SNORA38.1-201ENST00000364172 131 ntBASIC4.01□□□□□ -1.77
NOD1Q9Y239 Y_RNA.273-201ENST00000364703 102 ntBASIC4.01□□□□□ -1.77
NOD1Q9Y239 Y_RNA.353-201ENST00000365440 108 ntBASIC4.01□□□□□ -1.77
NOD1Q9Y239 RNU6-768P-201ENST00000384683 107 ntBASIC4.01□□□□□ -1.77
NOD1Q9Y239 SNORD65B-201ENST00000459126 73 ntBASIC4.01□□□□□ -1.77
NOD1Q9Y239 RPS26P55-201ENST00000471178 356 ntBASIC4.01□□□□□ -1.77
NOD1Q9Y239 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.01□□□□□ -1.77
NOD1Q9Y239 MIR3646-201ENST00000578301 84 ntBASIC4.01□□□□□ -1.77
NOD1Q9Y239 POLR3GP1-201ENST00000594073 261 ntBASIC4.01□□□□□ -1.77
NOD1Q9Y239 TUG1_4.1-201ENST00000619464 181 ntBASIC4.01□□□□□ -1.77
NOD1Q9Y239 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NOD1Q9Y239 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.01□□□□□ -1.77
NOD1Q9Y239 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.01□□□□□ -1.77
NOD1Q9Y239 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NOD1Q9Y239 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.01□□□□□ -1.77
NOD1Q9Y239 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
NOD1Q9Y239 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NOD1Q9Y239 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NOD1Q9Y239 MIR448-201ENST00000362131 111 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 RNU6-944P-201ENST00000364023 107 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 RNU1-33P-201ENST00000364249 162 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 SNORA14A-201ENST00000364773 135 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 RNU6-234P-201ENST00000365229 104 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 RNU6-1083P-201ENST00000384022 107 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 RNY3P5-201ENST00000384127 102 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 RNU6-57P-201ENST00000411348 103 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 RNU6-221P-201ENST00000459541 99 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 RN7SL807P-201ENST00000470923 297 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 AC025518.1-201ENST00000479856 347 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 AC010598.1-201ENST00000510378 103 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4□□□□□ -1.77
NOD1Q9Y239 SNORA70.18-201ENST00000516696 98 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 AC027419.1-201ENST00000522976 328 ntBASIC4□□□□□ -1.77
NOD1Q9Y239 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4□□□□□ -1.77
NOD1Q9Y239 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
NOD1Q9Y239 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4□□□□□ -1.77
NOD1Q9Y239 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4□□□□□ -1.77
NOD1Q9Y239 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
NOD1Q9Y239 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NOD1Q9Y239 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NOD1Q9Y239 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NOD1Q9Y239 AL049781.1-201ENST00000623195 3585 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NOD1Q9Y239 RNU6-486P-201ENST00000363116 107 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 RNU6-1323P-201ENST00000384025 107 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 RNU6-975P-201ENST00000384296 105 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 RNU6-1274P-201ENST00000384557 107 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 RNA5SP120-201ENST00000410900 112 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.99□□□□□ -1.77
NOD1Q9Y239 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.99□□□□□ -1.77
NOD1Q9Y239 AC016717.1-201ENST00000448918 286 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 RPS27P1-201ENST00000450552 247 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 AC092991.1-201ENST00000477176 376 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 AC083906.5-201ENST00000503722 328 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 RNU2-27P-201ENST00000516185 142 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 SNORA70.14-201ENST00000516205 110 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 SCARNA17.1-201ENST00000516211 143 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 SCARNA17.2-201ENST00000516334 143 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 AC109329.2-201ENST00000519658 482 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.99□□□□□ -1.77
NOD1Q9Y239 AC127455.1-201ENST00000565496 145 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 AC005972.2-201ENST00000604690 348 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 SCARNA17.4-201ENST00000614296 143 ntBASIC3.99□□□□□ -1.77
NOD1Q9Y239 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NOD1Q9Y239 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.99□□□□□ -1.77
NOD1Q9Y239 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NOD1Q9Y239 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.99□□□□□ -1.77
NOD1Q9Y239 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NOD1Q9Y239 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NOD1Q9Y239 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NOD1Q9Y239 AL356292.1-201ENST00000283110 373 ntBASIC3.98□□□□□ -1.77
NOD1Q9Y239 MIR513A2-201ENST00000385249 127 ntBASIC3.98□□□□□ -1.77
NOD1Q9Y239 RNU6-460P-201ENST00000391158 108 ntBASIC3.98□□□□□ -1.77
NOD1Q9Y239 SNORA11.2-201ENST00000408318 127 ntBASIC3.98□□□□□ -1.77
NOD1Q9Y239 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.98□□□□□ -1.77
NOD1Q9Y239 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.98□□□□□ -1.77
NOD1Q9Y239 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 203.4 ms