Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 USP8P1-201ENST00000494673 3183 ntBASIC4.42□□□□□ -1.7
LHX6Q9UPM6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 SNORA71.2-201ENST00000364941 134 ntBASIC4.42□□□□□ -1.7
LHX6Q9UPM6 RNU6-442P-201ENST00000383968 104 ntBASIC4.42□□□□□ -1.7
LHX6Q9UPM6 HMGN2P8-201ENST00000391458 268 ntBASIC4.42□□□□□ -1.7
LHX6Q9UPM6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 RPL23AP93-201ENST00000440847 484 ntBASIC4.42□□□□□ -1.7
LHX6Q9UPM6 AL691482.1-201ENST00000453255 87 ntBASIC4.42□□□□□ -1.7
LHX6Q9UPM6 AP002884.2-201ENST00000471647 395 ntBASIC4.42□□□□□ -1.7
LHX6Q9UPM6 RNU6-1291P-201ENST00000516591 104 ntBASIC4.42□□□□□ -1.7
LHX6Q9UPM6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 AL358944.1-201ENST00000528537 144 ntBASIC4.42□□□□□ -1.7
LHX6Q9UPM6 AL110115.1-201ENST00000614396 364 ntBASIC4.42□□□□□ -1.7
LHX6Q9UPM6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 MAPK10-320ENST00000641462 6696 ntBASIC4.42□□□□□ -1.7
LHX6Q9UPM6 AC000123.3-201ENST00000624029 4975 ntBASIC4.42□□□□□ -1.7
LHX6Q9UPM6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.42□□□□□ -1.7
LHX6Q9UPM6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX6Q9UPM6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX6Q9UPM6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX6Q9UPM6 NEAT1-202ENST00000501122 22743 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 RNU1-20P-201ENST00000363314 162 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 MIR522-201ENST00000385071 87 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LHX6Q9UPM6 MIR1253-201ENST00000408273 105 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 MIR1271-201ENST00000408537 86 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 RN7SKP200-201ENST00000410564 320 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 AC097463.2-201ENST00000421074 142 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 AL117339.2-201ENST00000430475 180 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 RPS15AP28-201ENST00000435088 386 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 AC025750.2-201ENST00000442609 450 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 RNA5SP310-201ENST00000459084 116 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 RN7SL271P-201ENST00000487601 295 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 AP003484.1-201ENST00000530974 250 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 ELOCP29-201ENST00000588193 334 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 CR392039.5-201ENST00000623201 510 ntBASIC4.41□□□□□ -1.7
LHX6Q9UPM6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX6Q9UPM6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX6Q9UPM6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX6Q9UPM6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.41□□□□□ -1.7
LHX6Q9UPM6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.41□□□□□ -1.7
LHX6Q9UPM6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX6Q9UPM6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX6Q9UPM6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LHX6Q9UPM6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.4□□□□□ -1.7
LHX6Q9UPM6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.4□□□□□ -1.7
LHX6Q9UPM6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LHX6Q9UPM6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
LHX6Q9UPM6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
LHX6Q9UPM6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.4□□□□□ -1.7
LHX6Q9UPM6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
LHX6Q9UPM6 RNA5SP513-201ENST00000364648 118 ntBASIC4.4□□□□□ -1.71
LHX6Q9UPM6 AC087499.4-201ENST00000448505 178 ntBASIC4.4□□□□□ -1.71
LHX6Q9UPM6 RNU7-23P-201ENST00000459465 62 ntBASIC4.4□□□□□ -1.71
LHX6Q9UPM6 RPS17P2-201ENST00000461663 408 ntBASIC4.4□□□□□ -1.71
LHX6Q9UPM6 AP001486.1-201ENST00000463339 476 ntBASIC4.4□□□□□ -1.71
LHX6Q9UPM6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.4□□□□□ -1.71
LHX6Q9UPM6 U7.4-201ENST00000614961 63 ntBASIC4.4□□□□□ -1.71
LHX6Q9UPM6 AL022401.1-201ENST00000619498 108 ntBASIC4.4□□□□□ -1.71
LHX6Q9UPM6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LHX6Q9UPM6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
LHX6Q9UPM6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
LHX6Q9UPM6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LHX6Q9UPM6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.4□□□□□ -1.71
LHX6Q9UPM6 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LHX6Q9UPM6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LHX6Q9UPM6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LHX6Q9UPM6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
LHX6Q9UPM6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
LHX6Q9UPM6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LHX6Q9UPM6 AC063976.2-201ENST00000425667 3556 ntBASIC4.39□□□□□ -1.71
LHX6Q9UPM6 RNA5SP366-201ENST00000365454 123 ntBASIC4.39□□□□□ -1.71
LHX6Q9UPM6 AL627390.1-201ENST00000396055 340 ntBASIC4.39□□□□□ -1.71
LHX6Q9UPM6 AC093578.1-201ENST00000415219 368 ntBASIC4.39□□□□□ -1.71
LHX6Q9UPM6 SCARNA10-201ENST00000459255 330 ntBASIC4.39□□□□□ -1.71
LHX6Q9UPM6 Vault.1-201ENST00000516474 102 ntBASIC4.39□□□□□ -1.71
LHX6Q9UPM6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.39□□□□□ -1.71
LHX6Q9UPM6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.39□□□□□ -1.71
LHX6Q9UPM6 AC002984.1-201ENST00000591692 448 ntBASIC4.39□□□□□ -1.71
LHX6Q9UPM6 AC012314.7-201ENST00000619693 93 ntBASIC4.39□□□□□ -1.71
LHX6Q9UPM6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
LHX6Q9UPM6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LHX6Q9UPM6 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LHX6Q9UPM6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LHX6Q9UPM6 AP001273.1-201ENST00000624493 3152 ntBASIC4.39□□□□□ -1.71
LHX6Q9UPM6 AC006971.1-201ENST00000407916 4486 ntBASIC4.38□□□□□ -1.71
LHX6Q9UPM6 LINC01355-201ENST00000566551 5444 ntBASIC4.38□□□□□ -1.71
LHX6Q9UPM6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LHX6Q9UPM6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms