Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.69□□□□□ -1.98
COL20A1Q9P218 AC125232.2-201ENST00000592457 143 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 AL390123.1-201ENST00000603216 237 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 AC124312.5-201ENST00000604451 268 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 SNORD11B-201ENST00000607707 90 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 AC067747.1-201ENST00000608026 250 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 AC135776.4-201ENST00000624300 1904 ntBASIC2.69□□□□□ -1.98
COL20A1Q9P218 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL20A1Q9P218 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL20A1Q9P218 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL20A1Q9P218 MIR21-201ENST00000362134 72 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 RNU1-23P-201ENST00000363361 144 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 SNORA38-201ENST00000363946 132 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 Y_RNA.380-201ENST00000365663 111 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 Y_RNA.455-201ENST00000384230 98 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 MIR329-1-201ENST00000385028 80 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
COL20A1Q9P218 AL357139.1-201ENST00000407792 426 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 RNU6-1001P-201ENST00000411265 100 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.68□□□□□ -1.98
COL20A1Q9P218 SDAD1P3-201ENST00000427380 333 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 AC009238.1-201ENST00000442165 424 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 AC009237.6-201ENST00000446969 424 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 AC007395.1-201ENST00000451333 677 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.68□□□□□ -1.98
COL20A1Q9P218 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
COL20A1Q9P218 AC104695.3-201ENST00000604052 296 ntBASIC2.68□□□□□ -1.98
COL20A1Q9P218 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.68□□□□□ -1.98
COL20A1Q9P218 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.68□□□□□ -1.98
COL20A1Q9P218 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
COL20A1Q9P218 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL20A1Q9P218 RNU6-1145P-201ENST00000384246 107 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 RNU6-823P-201ENST00000391042 103 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 MIR300-201ENST00000401138 83 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 AC010095.1-201ENST00000443543 144 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 FCF1P4-201ENST00000448326 183 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 RNU7-14P-201ENST00000459331 62 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.67□□□□□ -1.98
COL20A1Q9P218 RNU6-764P-201ENST00000516396 105 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 RNU6-965P-201ENST00000516721 96 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 RNU6-1098P-201ENST00000516772 96 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 RNU6-826P-201ENST00000516827 104 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 Y_RNA.713-201ENST00000517013 96 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 RNU6-1137P-201ENST00000517073 99 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 MTND5P35-201ENST00000557537 1720 ntBASIC2.67□□□□□ -1.98
COL20A1Q9P218 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.66□□□□□ -1.98
COL20A1Q9P218 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL20A1Q9P218 Y_RNA.152-201ENST00000363578 100 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 RNU6-611P-201ENST00000384276 104 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 RNU6-318P-201ENST00000384283 103 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 Y_RNA.551-201ENST00000384661 102 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 AL033519.2-201ENST00000403958 392 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 SNORD12B-201ENST00000410433 91 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 RNU7-26P-201ENST00000458980 63 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 RPS29P21-201ENST00000496272 170 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.66□□□□□ -1.98
COL20A1Q9P218 MIR449C-201ENST00000516047 92 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 Y_RNA.720-201ENST00000517166 92 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 DEFB131C-201ENST00000528817 165 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 AL121655.1-201ENST00000605811 308 ntBASIC2.66□□□□□ -1.98
COL20A1Q9P218 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.98
COL20A1Q9P218 RNA5SP361-201ENST00000362686 118 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 U8.2-201ENST00000363156 134 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 SNORA25B-201ENST00000365507 128 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 RNU6-438P-201ENST00000365561 103 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 Y_RNA.527-201ENST00000384573 102 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 MIR1252-201ENST00000408861 65 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 AC007064.1-201ENST00000412238 351 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.65□□□□□ -1.99
COL20A1Q9P218 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.65□□□□□ -1.99
COL20A1Q9P218 IFNA11P-201ENST00000446352 526 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 AC074290.1-201ENST00000448883 135 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.65□□□□□ -1.99
COL20A1Q9P218 PCNPP5-201ENST00000452246 481 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 MTND5P22-201ENST00000458380 195 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 AC091179.3-201ENST00000474761 144 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 AC074133.1-201ENST00000515696 183 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 RNU6-1012P-201ENST00000516606 109 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 AC034114.1-201ENST00000520293 285 ntBASIC2.65□□□□□ -1.99
COL20A1Q9P218 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.65□□□□□ -1.99
COL20A1Q9P218 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.65□□□□□ -1.99
COL20A1Q9P218 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL20A1Q9P218 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
COL20A1Q9P218 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.65□□□□□ -1.99
COL20A1Q9P218 Z82195.2-201ENST00000612348 18351 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 SNORD31B-201ENST00000364977 69 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 MRPL35P1-201ENST00000404272 572 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL20A1Q9P218 RPS15AP28-201ENST00000435088 386 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 UQCRBP2-201ENST00000447827 297 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 U8.20-201ENST00000459445 131 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 AC114982.1-201ENST00000469402 321 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 Y_RNA.715-201ENST00000517082 110 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 MIR5007-201ENST00000583098 95 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 AL355297.3-201ENST00000604082 446 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 MZT1P2-201ENST00000604387 248 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 Y_RNA.772-201ENST00000606692 102 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms