Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 IGKV2-26-201ENST00000518305 343 ntBASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 AC018630.3-201ENST00000542637 96 ntBASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 MIR5004-201ENST00000579078 107 ntBASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 MIR4724-201ENST00000579485 89 ntBASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 MIR4276-201ENST00000584832 70 ntBASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 AC091152.2-201ENST00000591628 2569 ntBASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 AP003122.5-201ENST00000527668 3766 ntBASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CXXC1Q9P0U4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 MAPK10-322ENST00000641485 4530 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 snoU2_19.4-201ENST00000364329 80 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 RNU6-438P-201ENST00000365561 103 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 SNORA20B-201ENST00000384220 132 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 SNORD14D-201ENST00000384390 87 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 RNU6-1081P-201ENST00000384537 107 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 MIR616-201ENST00000385293 97 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 U6atac.2-201ENST00000408644 118 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 AC126124.2-201ENST00000413542 321 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 AL121890.1-201ENST00000435457 205 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 AC010598.1-201ENST00000510378 103 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 AC107027.2-201ENST00000512197 115 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 RNU6-1007P-201ENST00000516586 107 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 U6.98-201ENST00000637157 84 ntBASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.84□□□□□ -1.79
CXXC1Q9P0U4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CXXC1Q9P0U4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CXXC1Q9P0U4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 Y_RNA.124-201ENST00000363339 93 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 RNU6-81P-201ENST00000365608 104 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 RNU6-969P-201ENST00000383900 105 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 AL355796.1-201ENST00000406706 323 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 ATP5EP1-201ENST00000510257 156 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 RNU6-948P-201ENST00000516374 107 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 AC105245.1-201ENST00000581934 244 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 MIR3199-1-201ENST00000582434 88 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 AL391903.3-201ENST00000612158 163 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 MIR7106-201ENST00000612419 65 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 MIR548AY-201ENST00000617669 107 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 AC068647.2-201ENST00000637380 353 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 MIR7515-201ENST00000637837 67 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 AC009487.4-201ENST00000624969 3585 ntBASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CXXC1Q9P0U4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 SNORA27.1-201ENST00000362604 124 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 RNU1-72P-201ENST00000362976 153 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 Y_RNA.497-201ENST00000384447 98 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 MIR218-1-201ENST00000384999 110 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 AC006028.1-201ENST00000438379 402 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 CKS1BP2-201ENST00000497342 240 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 AC025445.1-201ENST00000502728 300 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 RNA5SP341-201ENST00000516261 117 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 RNU6-1337P-201ENST00000516525 95 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 AC023043.3-201ENST00000593113 385 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 AL033523.1-201ENST00000605153 153 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 Y_RNA.778-201ENST00000620203 90 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 AC091895.1-201ENST00000624494 256 ntBASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
CXXC1Q9P0U4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 SNORA5B-201ENST00000363786 132 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 RNU6-151P-201ENST00000364158 107 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 Y_RNA.215-201ENST00000364204 112 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 RNU6-407P-201ENST00000365280 104 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 RNU6-376P-201ENST00000384731 106 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 MIR1183-201ENST00000408856 89 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 AC008134.1-201ENST00000420943 193 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 AC010154.1-201ENST00000425857 269 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 SNORD65B-201ENST00000459126 73 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 RPS26P55-201ENST00000471178 356 ntBASIC3.81□□□□□ -1.8
CXXC1Q9P0U4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms