Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 RNU6-682P-201ENST00000363843 106 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 Y_RNA.368-201ENST00000365547 113 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 RNU6-47P-201ENST00000383866 107 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 Y_RNA.456-201ENST00000384232 111 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 RNU6-918P-201ENST00000391219 106 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 RN7SKP111-201ENST00000410349 271 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
UBP1Q9NZI7 RNU6-221P-201ENST00000459541 99 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 AC021205.2-201ENST00000480069 347 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.36□□□□□ -1.87
UBP1Q9NZI7 RNU6-948P-201ENST00000516374 107 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 SNORA48.11-201ENST00000517015 89 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 MIR3616-201ENST00000584070 92 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 AL356280.1-201ENST00000603614 379 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 uc_338.1-201ENST00000612113 180 ntBASIC3.36□□□□□ -1.87
UBP1Q9NZI7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBP1Q9NZI7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
UBP1Q9NZI7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBP1Q9NZI7 AL357139.1-201ENST00000407792 426 ntBASIC3.35□□□□□ -1.87
UBP1Q9NZI7 RNU2-63P-201ENST00000410792 194 ntBASIC3.35□□□□□ -1.87
UBP1Q9NZI7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.35□□□□□ -1.87
UBP1Q9NZI7 ARF4P2-201ENST00000430209 526 ntBASIC3.35□□□□□ -1.87
UBP1Q9NZI7 HMGN1P18-201ENST00000457642 277 ntBASIC3.35□□□□□ -1.87
UBP1Q9NZI7 Y_RNA.637-201ENST00000459424 114 ntBASIC3.35□□□□□ -1.87
UBP1Q9NZI7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.35□□□□□ -1.87
UBP1Q9NZI7 AL137100.2-201ENST00000555786 315 ntBASIC3.35□□□□□ -1.87
UBP1Q9NZI7 AC099778.2-201ENST00000610904 211 ntBASIC3.35□□□□□ -1.87
UBP1Q9NZI7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBP1Q9NZI7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBP1Q9NZI7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBP1Q9NZI7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
UBP1Q9NZI7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
UBP1Q9NZI7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UBP1Q9NZI7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UBP1Q9NZI7 RNU6-653P-201ENST00000363074 106 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 RNU6-801P-201ENST00000364087 105 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 Y_RNA.233-201ENST00000364407 101 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 RNU6-923P-201ENST00000364753 107 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 Y_RNA.287-201ENST00000364853 94 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 Y_RNA.308-201ENST00000365043 101 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 RNU6-438P-201ENST00000365561 103 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
UBP1Q9NZI7 RNU6-763P-201ENST00000390865 106 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 MIR548M-201ENST00000408260 86 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 RNU2-32P-201ENST00000411193 191 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 AC093578.1-201ENST00000415219 368 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.34□□□□□ -1.87
UBP1Q9NZI7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
UBP1Q9NZI7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.34□□□□□ -1.87
UBP1Q9NZI7 AC109925.1-201ENST00000478069 331 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 RNU2-34P-201ENST00000516534 121 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 RNU6-861P-201ENST00000516745 106 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 AC087441.2-201ENST00000529141 262 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 U6.106-201ENST00000636360 105 ntBASIC3.34□□□□□ -1.87
UBP1Q9NZI7 AL161912.2-201ENST00000565707 3007 ntBASIC3.34□□□□□ -1.88
UBP1Q9NZI7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
UBP1Q9NZI7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.88
UBP1Q9NZI7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
UBP1Q9NZI7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.34□□□□□ -1.88
UBP1Q9NZI7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.33□□□□□ -1.88
UBP1Q9NZI7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.33□□□□□ -1.88
UBP1Q9NZI7 SNORA71.3-201ENST00000362582 128 ntBASIC3.33□□□□□ -1.88
UBP1Q9NZI7 RNU6-271P-201ENST00000363858 105 ntBASIC3.33□□□□□ -1.88
UBP1Q9NZI7 MIR449B-201ENST00000384995 97 ntBASIC3.33□□□□□ -1.88
UBP1Q9NZI7 MIR873-201ENST00000401120 77 ntBASIC3.33□□□□□ -1.88
UBP1Q9NZI7 RNU6-855P-201ENST00000410395 104 ntBASIC3.33□□□□□ -1.88
UBP1Q9NZI7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.33□□□□□ -1.88
UBP1Q9NZI7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.33□□□□□ -1.88
UBP1Q9NZI7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.33□□□□□ -1.88
UBP1Q9NZI7 Y_RNA.662-201ENST00000516028 97 ntBASIC3.33□□□□□ -1.88
UBP1Q9NZI7 RNU6-1212P-201ENST00000517023 104 ntBASIC3.33□□□□□ -1.88
UBP1Q9NZI7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.33□□□□□ -1.88
UBP1Q9NZI7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.33□□□□□ -1.88
UBP1Q9NZI7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.33□□□□□ -1.88
UBP1Q9NZI7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.33□□□□□ -1.88
UBP1Q9NZI7 AC025754.2-201ENST00000606491 432 ntBASIC3.33□□□□□ -1.88
UBP1Q9NZI7 U6.105-201ENST00000637379 88 ntBASIC3.33□□□□□ -1.88
UBP1Q9NZI7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBP1Q9NZI7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UBP1Q9NZI7 RNA5SP119-201ENST00000362715 117 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 RNA5SP387-201ENST00000364226 106 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 RNU1-33P-201ENST00000364249 162 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 Y_RNA.341-201ENST00000365341 102 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 SNORA72.4-201ENST00000384174 132 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 RNU6-1235P-201ENST00000384559 107 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 MIR183-201ENST00000384958 110 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 CST9LP2-201ENST00000437612 320 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 EEF1B2P7-201ENST00000451177 676 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 RNU6-498P-201ENST00000459468 107 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 MIR3186-201ENST00000577404 85 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 MIR5047-201ENST00000579212 100 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.32□□□□□ -1.88
UBP1Q9NZI7 MIR1248-201ENST00000629190 106 ntBASIC3.32□□□□□ -1.88
UBP1Q9NZI7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.32□□□□□ -1.88
UBP1Q9NZI7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBP1Q9NZI7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBP1Q9NZI7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
UBP1Q9NZI7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBP1Q9NZI7 RNU6-899P-201ENST00000363947 107 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 Y_RNA.240-201ENST00000364469 95 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms