Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 Y_RNA.400-201ENST00000383963 111 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 RNU6-1081P-201ENST00000384537 107 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 MIR548B-201ENST00000385247 97 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 MIR767-201ENST00000390228 109 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 RNU6-381P-201ENST00000391259 108 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 AC097463.2-201ENST00000421074 142 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 RN7SL863P-201ENST00000462370 296 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 RN7SL93P-201ENST00000463035 293 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 SRIP1-201ENST00000489235 288 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 XIST_intron.1-201ENST00000619444 68 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 AL136164.4-201ENST00000625013 2135 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 AC008873.1-201ENST00000625051 138 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.65□□□□□ -1.82
TMEM39AQ9NV64 RNU1-105P-201ENST00000363470 161 ntBASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 RNA5SP42-201ENST00000364278 115 ntBASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 RNU4-10P-201ENST00000364383 140 ntBASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 SNORA72.4-201ENST00000384174 132 ntBASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 RNU6-855P-201ENST00000410395 104 ntBASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 RPL17P51-201ENST00000605218 238 ntBASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 AC091152.2-201ENST00000591628 2569 ntBASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMEM39AQ9NV64 AC068700.1-201ENST00000565862 3754 ntBASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 RNU6-275P-201ENST00000364910 107 ntBASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 Y_RNA.341-201ENST00000365341 102 ntBASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 Y_RNA.368-201ENST00000365547 113 ntBASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 Y_RNA.488-201ENST00000384403 102 ntBASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 Y_RNA.497-201ENST00000384447 98 ntBASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 EIF4EP4-201ENST00000424916 578 ntBASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 AC008739.2-201ENST00000597006 317 ntBASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.64□□□□□ -1.83
TMEM39AQ9NV64 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 MIR449A-201ENST00000362113 91 ntBASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 RNU6-899P-201ENST00000363947 107 ntBASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 SNORA8.3-201ENST00000384679 139 ntBASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 MIR626-201ENST00000385032 94 ntBASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 MIR591-201ENST00000385290 95 ntBASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 RNU6-131P-201ENST00000391144 107 ntBASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 AL139281.1-201ENST00000422120 335 ntBASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 RN7SKP164-201ENST00000516138 266 ntBASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 RPL30P11-203ENST00000598995 310 ntBASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 AC069294.1-201ENST00000608397 350 ntBASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 RNVU1-4-201ENST00000612985 164 ntBASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 AC091895.1-201ENST00000624494 256 ntBASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.63□□□□□ -1.83
TMEM39AQ9NV64 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 SNORD32B-201ENST00000364460 84 ntBASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 Y_RNA.456-201ENST00000384232 111 ntBASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 RNU6-1117P-201ENST00000384525 104 ntBASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 MIR586-201ENST00000385035 97 ntBASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 RNA5SP354-201ENST00000391247 136 ntBASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 SNORD116-25-201ENST00000516517 92 ntBASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 RNU5F-4P-201ENST00000516581 114 ntBASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 RNU6-1098P-201ENST00000516772 96 ntBASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 MIR4744-201ENST00000581563 82 ntBASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 AC090517.3-201ENST00000625170 141 ntBASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.62□□□□□ -1.83
TMEM39AQ9NV64 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 RNU6-103P-201ENST00000363686 107 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 Y_RNA.215-201ENST00000364204 112 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 snoU2_19.4-201ENST00000364329 80 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 Y_RNA.310-201ENST00000365063 113 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 Y_RNA.361-201ENST00000365515 120 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms