Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC008536.2-201ENST00000607284 349 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 AC064836.2-201ENST00000609491 462 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 RMST_3.1-201ENST00000611651 109 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 AL050303.3-201ENST00000613704 284 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 AC106754.2-201ENST00000623006 233 ntBASIC0.72□□□□□ -2.29
VAT1Q99536 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
VAT1Q99536 RNU6-1120P-201ENST00000362988 108 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 RNU6-505P-201ENST00000384427 107 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 SNORA12.1-201ENST00000390873 148 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 RNU6-440P-201ENST00000390882 105 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.71□□□□□ -2.3
VAT1Q99536 AC063976.4-201ENST00000421971 163 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 MTCO2P11-201ENST00000431069 680 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 SNRPGP9-201ENST00000456025 225 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 Y_RNA.638-201ENST00000459374 113 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 CCDC34P1-201ENST00000507441 517 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 SNORA14.1-201ENST00000516113 141 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.71□□□□□ -2.3
VAT1Q99536 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.71□□□□□ -2.3
VAT1Q99536 MIR3913-1-201ENST00000577744 102 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 AC136443.5-201ENST00000603741 370 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 SNRPGP20-201ENST00000604477 205 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 HULC.1-201ENST00000612720 240 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 AL359075.3-201ENST00000613288 217 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 snoZ196.1-201ENST00000625269 89 ntBASIC0.71□□□□□ -2.3
VAT1Q99536 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.71□□□□□ -2.3
VAT1Q99536 AC018630.2-201ENST00000534866 2403 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 Y_RNA.123-201ENST00000363338 102 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 Y_RNA.124-201ENST00000363339 93 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 RNU6-1317P-201ENST00000364582 104 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 SNORD114-24-201ENST00000365029 72 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 RNU6-1240P-201ENST00000365155 104 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 RNY3P10-201ENST00000384764 102 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 MT-TH-201ENST00000387441 69 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 RNA5SP219-201ENST00000390940 113 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 MIR1276-201ENST00000408707 83 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.7□□□□□ -2.3
VAT1Q99536 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.7□□□□□ -2.3
VAT1Q99536 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.7□□□□□ -2.3
VAT1Q99536 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 RNU6-221P-201ENST00000459541 99 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 AP001372.4-201ENST00000524889 472 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 MIR4781-201ENST00000585250 76 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 GHRLOS.1-201ENST00000610995 70 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.7□□□□□ -2.3
VAT1Q99536 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 AC068792.1-201ENST00000621354 417 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 AL078596.1-201ENST00000624856 447 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 AL390237.1-201ENST00000404226 1415 ntBASIC0.7□□□□□ -2.3
VAT1Q99536 Y_RNA.201-201ENST00000364052 96 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 Y_RNA.363-201ENST00000365529 113 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 SNORD12-201ENST00000391002 90 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 MTATP6P18-201ENST00000417994 673 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.69□□□□□ -2.3
VAT1Q99536 AL358934.1-201ENST00000432346 324 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 AC245047.7-201ENST00000440265 293 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 SRRM1P2-201ENST00000464531 1192 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 AF186996.7-201ENST00000492781 209 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.69□□□□□ -2.3
VAT1Q99536 HMGB1P29-201ENST00000505659 499 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 AC105758.1-201ENST00000506038 399 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 SNORD79.1-201ENST00000516069 84 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 RNU6-197P-201ENST00000516680 100 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 MTND4P7-201ENST00000523876 130 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.69□□□□□ -2.3
VAT1Q99536 FGF7P1-201ENST00000582820 288 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 AL360219.1-201ENST00000610230 366 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 uc_338.34-201ENST00000617467 174 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 AL513423.1-201ENST00000621695 132 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 AC008873.1-201ENST00000625051 138 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 SNORD3E-202ENST00000627253 216 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 SCARNA4-201ENST00000629045 128 ntBASIC0.69□□□□□ -2.3
VAT1Q99536 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.69□□□□□ -2.3
VAT1Q99536 Y_RNA.159-201ENST00000363674 87 ntBASIC0.68□□□□□ -2.3
VAT1Q99536 MRPL42P3-201ENST00000401492 326 ntBASIC0.68□□□□□ -2.3
VAT1Q99536 CDK8P2-201ENST00000415020 547 ntBASIC0.68□□□□□ -2.3
VAT1Q99536 AC008134.1-201ENST00000420943 193 ntBASIC0.68□□□□□ -2.3
VAT1Q99536 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
VAT1Q99536 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.68□□□□□ -2.3
VAT1Q99536 AC245047.3-201ENST00000429428 127 ntBASIC0.68□□□□□ -2.3
VAT1Q99536 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.68□□□□□ -2.3
VAT1Q99536 AL031667.1-201ENST00000440222 725 ntBASIC0.68□□□□□ -2.3
VAT1Q99536 U8.21-201ENST00000459536 136 ntBASIC0.68□□□□□ -2.3
VAT1Q99536 PDCD5P2-201ENST00000507570 312 ntBASIC0.68□□□□□ -2.3
VAT1Q99536 RNU7-128P-201ENST00000517247 62 ntBASIC0.68□□□□□ -2.3
VAT1Q99536 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.68□□□□□ -2.3
VAT1Q99536 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.68□□□□□ -2.3
VAT1Q99536 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.68□□□□□ -2.3
VAT1Q99536 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
VAT1Q99536 OR5AK4P-201ENST00000635912 903 ntBASIC0.68□□□□□ -2.3
VAT1Q99536 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
VAT1Q99536 RNU4-76P-201ENST00000364509 141 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 RNU6-996P-201ENST00000365438 107 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 RNU5A-2P-201ENST00000384337 116 ntBASIC0.67□□□□□ -2.3
VAT1Q99536 MIR608-201ENST00000384820 100 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms