Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AP003168.1-201ENST00000530091 307 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.39
LYSMD1Q96S90 AC068792.1-201ENST00000621354 417 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 AL078595.3-201ENST00000623815 1166 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 AL359697.1-201ENST00000624879 587 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 U6.114-201ENST00000636407 96 ntBASIC0.15□□□□□ -2.39
LYSMD1Q96S90 Y_RNA.18-201ENST00000362461 102 ntBASIC0.14□□□□□ -2.39
LYSMD1Q96S90 RNU6-931P-201ENST00000363850 107 ntBASIC0.14□□□□□ -2.39
LYSMD1Q96S90 RNU6-1257P-201ENST00000384625 110 ntBASIC0.14□□□□□ -2.39
LYSMD1Q96S90 RNU6-1000P-201ENST00000391066 106 ntBASIC0.14□□□□□ -2.39
LYSMD1Q96S90 EXOSC3P1-201ENST00000448649 500 ntBASIC0.14□□□□□ -2.39
LYSMD1Q96S90 AC245047.8-201ENST00000456455 284 ntBASIC0.14□□□□□ -2.39
LYSMD1Q96S90 RNU7-57P-201ENST00000459540 60 ntBASIC0.14□□□□□ -2.39
LYSMD1Q96S90 AC087854.1-201ENST00000519706 414 ntBASIC0.14□□□□□ -2.39
LYSMD1Q96S90 AC023932.2-201ENST00000603176 175 ntBASIC0.14□□□□□ -2.39
LYSMD1Q96S90 AL096861.1-201ENST00000610899 123 ntBASIC0.14□□□□□ -2.39
LYSMD1Q96S90 AL138726.1-201ENST00000614873 333 ntBASIC0.14□□□□□ -2.39
LYSMD1Q96S90 AL049777.1-201ENST00000622740 518 ntBASIC0.14□□□□□ -2.39
LYSMD1Q96S90 MIRLET7D-201ENST00000362263 87 ntBASIC0.13□□□□□ -2.39
LYSMD1Q96S90 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
LYSMD1Q96S90 RNU4-41P-201ENST00000364426 143 ntBASIC0.13□□□□□ -2.39
LYSMD1Q96S90 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.13□□□□□ -2.39
LYSMD1Q96S90 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.13□□□□□ -2.39
LYSMD1Q96S90 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.13□□□□□ -2.39
LYSMD1Q96S90 MTCO3P8-201ENST00000453691 755 ntBASIC0.13□□□□□ -2.39
LYSMD1Q96S90 AC108740.1-201ENST00000498629 225 ntBASIC0.13□□□□□ -2.39
LYSMD1Q96S90 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.13□□□□□ -2.39
LYSMD1Q96S90 Y_RNA.670-201ENST00000516255 105 ntBASIC0.13□□□□□ -2.39
LYSMD1Q96S90 SNORD111.1-201ENST00000516421 86 ntBASIC0.13□□□□□ -2.39
LYSMD1Q96S90 SCARNA24.1-201ENST00000516465 137 ntBASIC0.13□□□□□ -2.39
LYSMD1Q96S90 AC022616.3-201ENST00000523940 148 ntBASIC0.13□□□□□ -2.39
LYSMD1Q96S90 AC016256.1-201ENST00000547971 354 ntBASIC0.13□□□□□ -2.39
LYSMD1Q96S90 MIR1273G-201ENST00000577677 100 ntBASIC0.13□□□□□ -2.39
LYSMD1Q96S90 AC121333.1-201ENST00000567488 2709 ntBASIC0.13□□□□□ -2.39
LYSMD1Q96S90 MIR330-201ENST00000362196 94 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 RNY1P12-201ENST00000364251 105 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
LYSMD1Q96S90 SNORD115.1-201ENST00000391109 76 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AC004866.1-201ENST00000411748 78 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AC244098.3-201ENST00000424803 96 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 MTCO2P23-201ENST00000425216 680 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 CALM2P4-201ENST00000430810 426 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AL162725.1-201ENST00000435405 301 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.12□□□□□ -2.39
LYSMD1Q96S90 LINC01399-202ENST00000458450 244 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AC106038.2-201ENST00000520706 568 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.12□□□□□ -2.39
LYSMD1Q96S90 MTND1P15-201ENST00000579262 949 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AC131055.1-201ENST00000584626 316 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AL162424.1-201ENST00000602325 221 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AL359999.1-201ENST00000604513 294 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 TCL6_2.1-201ENST00000615162 119 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AC104010.1-201ENST00000616889 150 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AC009159.2-201ENST00000617603 606 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AL031667.3-201ENST00000620124 655 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 AC091925.1-201ENST00000623204 462 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.12□□□□□ -2.39
LYSMD1Q96S90 MTND5P16-201ENST00000460269 1703 ntBASIC0.12□□□□□ -2.39
LYSMD1Q96S90 RNU6-222P-201ENST00000362438 107 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 RNU5E-10P-201ENST00000363506 118 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 RNU4-92P-201ENST00000363783 136 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 RNU6-1327P-201ENST00000365302 105 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 SNORA2.2-201ENST00000365473 135 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 RNU6-636P-201ENST00000384598 107 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 RNU6-1067P-201ENST00000384752 107 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 RPL23AP50-201ENST00000434149 455 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.11□□□□□ -2.39
LYSMD1Q96S90 TPT1P7-201ENST00000458300 517 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 OR9P1P-201ENST00000496431 281 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.11□□□□□ -2.39
LYSMD1Q96S90 RNU1-117P-201ENST00000517041 158 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.11□□□□□ -2.39
LYSMD1Q96S90 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.11□□□□□ -2.39
LYSMD1Q96S90 AC109810.1-201ENST00000534066 224 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 AC026470.2-201ENST00000561492 181 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 MIR4514-201ENST00000581410 57 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.11□□□□□ -2.39
LYSMD1Q96S90 AP000907.4-201ENST00000604143 237 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 AC002044.1-201ENST00000606707 158 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 RNU6-94P-201ENST00000607728 107 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 AL391903.3-201ENST00000612158 163 ntBASIC0.11□□□□□ -2.39
LYSMD1Q96S90 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.11□□□□□ -2.39
LYSMD1Q96S90 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
LYSMD1Q96S90 RNU5F-6P-201ENST00000362979 116 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 RNU4-67P-201ENST00000364569 141 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 RNU6-1240P-201ENST00000365155 104 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 SNORA20.2-201ENST00000383922 131 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 U8.16-201ENST00000391279 133 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 MTND3P17-201ENST00000416968 344 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 AC106883.1-201ENST00000418805 562 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 MTCO2P21-201ENST00000419780 677 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 AC008134.1-201ENST00000420943 193 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 AL354692.1-201ENST00000423044 315 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 AC009237.7-201ENST00000447357 229 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 AC067940.1-201ENST00000458411 300 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 snoU13.25-201ENST00000458945 104 ntBASIC0.1□□□□□ -2.39
LYSMD1Q96S90 MTCO2P6-201ENST00000463134 685 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms